RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 MTHFD1LQ6UB35 978 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 MOGAT1Q96PD6 335 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 SNX18Q96RF0 628 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 THAP7Q9BT49 309 aaPredicted RBP4.28□□□□□ -1.72
LRRC28-218ENST00000560236 SLC13A1Q9BZW2 595 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 SPC25Q9HBM1 224 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 PNPOQ9NVS9 261 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 NDRG4Q9ULP0 352 aaKnown RBP4.28□□□□□ -1.72
LRRC28-218ENST00000560236 NRXN1Q9ULB1 1477 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 OVOS2A0A0G2JMS6 1433 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 OVOS2A0A0J9YW53 1432 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 DAPK1P53355 1430 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 OVOS2Q6IE36 1432 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 CLTCL1P53675 1640 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 TULP4Q9NRJ4 1543 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 DSCR3O14972 297 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 UNC5CO95185 931 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 ZRANB2O95218 330 aaKnown RBP eCLIP4.27□□□□□ -1.73
LRRC28-218ENST00000560236 MAP2K6P52564 334 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 LINC00205P59089 165 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 SATB1Q01826 763 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 EGFLAMQ63HQ2 1017 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 IRF2BP2Q7Z5L9 587 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 C16orf52Q8NHV5 167 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 BRIX1Q8TDN6 353 aaKnown RBP4.27□□□□□ -1.73
LRRC28-218ENST00000560236 NSMCE1Q8WV22 266 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 ZC3H10Q96K80 434 aaKnown RBP4.27□□□□□ -1.73
LRRC28-218ENST00000560236 CIPCQ9C0C6 399 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 MTMR4Q9NYA4 1195 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 TFCP2L1Q9NZI6 479 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 GABRQQ9UN88 632 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 SHOC2Q9UQ13 582 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 PHRF1Q9P1Y6 1649 aaKnown RBP4.27□□□□□ -1.73
LRRC28-218ENST00000560236 NAIPQ13075 1403 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 PPLO60437 1756 aa4.27□□□□□ -1.73
LRRC28-218ENST00000560236 PAPPAQ13219 1627 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 IGKV2D-30A0A075B6S6 120 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 H3BUI4 141 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 hCG_1984214I3L0E3 225 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 FCHO1O14526 889 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 GRPP07492 148 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 HDCP19113 662 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 CDK11BP21127 795 aaKnown RBP4.26□□□□□ -1.73
LRRC28-218ENST00000560236 SCP2P22307 547 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 RENBPP51606 427 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 ALDH5A1P51649 535 aaPredicted RBP4.26□□□□□ -1.73
LRRC28-218ENST00000560236 CCDC157Q569K6 752 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 DEPDC1Q5TB30 811 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 EMC10Q5UCC4 262 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 ZNF813Q6ZN06 617 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 USP45Q70EL2 814 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 PRR18Q8N4B5 295 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 ADAMTS15Q8TE58 950 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 SOCS4Q8WXH5 440 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 CUL5Q93034 780 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 COQ8BQ96D53 544 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 LENG8Q96PV6 779 aaPredicted RBP4.26□□□□□ -1.73
LRRC28-218ENST00000560236 DPCDQ9BVM2 203 aaPredicted RBP4.26□□□□□ -1.73
LRRC28-218ENST00000560236 MRPS17Q9Y2R5 130 aaKnown RBP4.26□□□□□ -1.73
LRRC28-218ENST00000560236 PLEKHM1Q9Y4G2 1056 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 BCL9O00512 1426 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 TNS2Q63HR2 1409 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 KAT6BQ8WYB5 2073 aa4.26□□□□□ -1.73
LRRC28-218ENST00000560236 TUBGCP6Q96RT7 1819 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 TNKSO95271 1327 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 ATP7BP35670 1465 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 LRRC37A3O60309 1634 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 TECPR2O15040 1411 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 PRKCBP05771 671 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 TMEM191BP0C7N4 346 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 FPR3P25089 353 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 VIPR2P41587 438 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 KCNJ5P48544 419 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 PDE6CP51160 858 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 SOX8P57073 446 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 EVA1CP58658 441 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 FAM50AQ14320 339 aaKnown RBP4.25□□□□□ -1.73
LRRC28-218ENST00000560236 RBMS2Q15434 407 aaKnown RBP4.25□□□□□ -1.73
LRRC28-218ENST00000560236 MIDNQ504T8 468 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 SLC15A3Q8IY34 581 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 TCP11L2Q8N4U5 519 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 OSCP1Q8WVF1 389 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 EFHD1Q9BUP0 239 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 PRDM11Q9NQV5 511 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 ANKRD50Q9ULJ7 1429 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 LRP12Q9Y561 859 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 NHSQ6T4R5 1651 aa4.25□□□□□ -1.73
LRRC28-218ENST00000560236 GOLGB1Q14789 3259 aaKnown RBP4.25□□□□□ -1.73
LRRC28-218ENST00000560236 KAT6AQ92794 2004 aa4.24□□□□□ -1.73
LRRC28-218ENST00000560236 ITSN1Q15811 1721 aa4.24□□□□□ -1.73
LRRC28-218ENST00000560236 SSH2Q76I76 1423 aa4.24□□□□□ -1.73
LRRC28-218ENST00000560236 CCDC187A0A096LP49 1063 aa4.24□□□□□ -1.73
LRRC28-218ENST00000560236 TCRBV5S1A1TA0A578 114 aa4.24□□□□□ -1.73
LRRC28-218ENST00000560236 ADAM10O14672 748 aa4.24□□□□□ -1.73
LRRC28-218ENST00000560236 HSPA1AP0DMV8 641 aaKnown RBP4.24□□□□□ -1.73
LRRC28-218ENST00000560236 HSPA1BP0DMV9 641 aaKnown RBP4.24□□□□□ -1.73
LRRC28-218ENST00000560236 PRF1P14222 555 aa4.24□□□□□ -1.73
LRRC28-218ENST00000560236 LRPAP1P30533 357 aa4.24□□□□□ -1.73
LRRC28-218ENST00000560236 RECQLP46063 649 aaPredicted RBP4.24□□□□□ -1.73
LRRC28-218ENST00000560236 RGS19P49795 217 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms