RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 GPD1LQ8N335 351 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 FBXO32Q969P5 355 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 OTUB2Q96DC9 234 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 ANKRD36BP1Q96IX9 119 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 OLFML3Q9NRN5 406 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 APOBEC2Q9Y235 224 aaKnown RBP16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 BTBD3Q9Y2F9 522 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 SH3BP1Q9Y3L3 701 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 CKAP5Q14008 2032 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 SHROOM3Q8TF72 1996 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 FAM149AA5PLN7 773 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 NEDD8-MDP1E9PL57 170 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 NDUFS2O75306 463 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 PRPF6O94906 941 aaKnown RBP16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 DKK1O94907 266 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 PTPN1P18031 435 aaKnown RBP16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 CYP4F3Q08477 520 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 CAMK2BQ13554 666 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 GRAMD4Q6IC98 578 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 CCDC73Q6ZRK6 1079 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 PAQR9Q6ZVX9 377 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 STXBP4Q6ZWJ1 553 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 NUP93Q8N1F7 819 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 SETD7Q8WTS6 366 aaKnown RBP16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 FAM124BQ9H5Z6 455 aaPredicted RBP16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 EHD2Q9NZN4 543 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 GMIPQ9P107 970 aa16.55■□□□□ 0.24
AC243562.3-201ENST00000559866 GOLGA8CPA6NN73 597 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 KIAA0391O15091 583 aaKnown RBP16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 CACNG3O60359 315 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 TNNC2P02585 160 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 ZDHHC11BP0C7U3 371 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 GNL1P36915 607 aaPredicted RBP16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 STAT6P42226 847 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 SURF1Q15526 300 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 HECTD3Q5T447 861 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 TPGS1Q6ZTW0 290 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 OR6B3Q8NGW1 331 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 DNASE2BQ8WZ79 361 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 HPS3Q969F9 1004 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 ELMO3Q96BJ8 720 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 TOE1Q96GM8 510 aaKnown RBP16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 ELOVL4Q9GZR5 314 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 GAREM1Q9H706 876 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 KIAA1522Q9P206 1035 aaPredicted RBP16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 DKK4Q9UBT3 224 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 SUSD2Q9UGT4 822 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 FBXO2Q9UK22 296 aaPredicted RBP16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 SRPRBQ9Y5M8 271 aaKnown RBP16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 CLIC4Q9Y696 253 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 PLXNA2O75051 1894 aa16.54■□□□□ 0.24
AC243562.3-201ENST00000559866 HELZ2Q9BYK8 2649 aaKnown RBP16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 TENM4Q6N022 2769 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 A0A1B0GTW7 788 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 FRMD3A2A2Y4 597 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 CILPO75339 1184 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 TACC1O75410 805 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 CISD3P0C7P0 127 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 NCAM1P13591 858 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 TYRP14679 529 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 CD6P30203 668 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 HOXD13P35453 343 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 SLC5A3P53794 718 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 FUT11Q495W5 492 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 SYCP2LQ5T4T6 812 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 SNX30Q5VWJ9 437 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 TRAPPC11Q7Z392 1133 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 B3GALNT2Q8NCR0 500 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 PDZD8Q8NEN9 1154 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 OVCA2Q8WZ82 227 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 DUSP9Q99956 384 aaKnown RBP16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 GPR174Q9BXC1 333 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 MKRN2Q9H000 416 aaKnown RBP16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 GZF1Q9H116 711 aaPredicted RBP16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 MIR1-1HGQ9H1L0 117 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 SNX25Q9H3E2 840 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 PRDM16Q9HAZ2 1276 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 TM7SF3Q9NS93 570 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 PANK4Q9NVE7 773 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 WSB2Q9NYS7 404 aaPredicted RBP16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 IL37Q9NZH6 218 aa16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 USP36Q9P275 1121 aaKnown RBP16.53■□□□□ 0.24
AC243562.3-201ENST00000559866 A0A087X0B3 334 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 TRABD2BA6NFA1 517 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 CYSRT1A8MQ03 144 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 MEI4A8MW99 385 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 BEST1O76090 585 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 TBX18O95935 607 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 GNSP15586 552 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 WDR45BQ5MNZ6 344 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 DCAF12L1Q5VU92 463 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 FAM35AQ86V20 835 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 CACUL1Q86Y37 369 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 CCDC65Q8IXS2 484 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 ZMIZ2Q8NF64 920 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 BHMTQ93088 406 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 BBS2Q9BXC9 721 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 OSER1Q9NX31 292 aa16.52■□□□□ 0.24
AC243562.3-201ENST00000559866 KALRNO60229 2985 aa16.51■□□□□ 0.23
AC243562.3-201ENST00000559866 A0A087WV48 116 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms