RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 PCIF1Q9H4Z3 704 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 ECT2Q9H8V3 914 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 MRPL44Q9H9J2 332 aaKnown RBP6.21□□□□□ -1.42
USP3-215ENST00000559771 KIF9Q9HAQ2 790 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 INTS13Q9NVM9 706 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 THG1LQ9NWX6 298 aaKnown RBP6.21□□□□□ -1.42
USP3-215ENST00000559771 RBAKQ9NYW8 714 aaPredicted RBP6.21□□□□□ -1.42
USP3-215ENST00000559771 ZMYM5Q9UJ78 669 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 SNX9Q9Y5X1 595 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 WNT6Q9Y6F9 365 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 MORC2Q9Y6X9 1032 aaPredicted RBP6.21□□□□□ -1.42
USP3-215ENST00000559771 NUP205Q92621 2012 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 AKAP13Q12802 2813 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 VPS37CA5D8V6 355 aaPredicted RBP6.2□□□□□ -1.42
USP3-215ENST00000559771 K7EQS6 105 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 TGFB1I1O43294 461 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 HUS1O60921 280 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 AKAP3O75969 853 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 GCNT3O95395 438 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 OLFM2O95897 454 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 CST3P01034 146 aaPredicted RBP6.2□□□□□ -1.42
USP3-215ENST00000559771 TGFB1P01137 390 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 GAP43P17677 238 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 SYT1P21579 422 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 DRD1P21728 446 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 PMLP29590 882 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 MAGEA11P43364 429 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 PSMC1P62191 440 aaKnown RBP6.2□□□□□ -1.42
USP3-215ENST00000559771 RBP5P82980 135 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 TSPY1Q01534 308 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 CEBPZQ03701 1054 aaKnown RBP6.2□□□□□ -1.42
USP3-215ENST00000559771 GRSF1Q12849 480 aaKnown RBP eCLIP6.2□□□□□ -1.42
USP3-215ENST00000559771 BFSP1Q12934 665 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 SLC39A14Q15043 492 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 PDGFRLQ15198 375 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 TAF12Q16514 161 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 N4BP2L1Q5TBK1 243 aaPredicted RBP6.2□□□□□ -1.42
USP3-215ENST00000559771 STPG1Q5TH74 334 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 RRAGBQ5VZM2 374 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 CEP68Q76N32 757 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 SV2BQ7L1I2 683 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 EPM2AIP1Q7L775 607 aaPredicted RBP6.2□□□□□ -1.42
USP3-215ENST00000559771 SYT13Q7L8C5 426 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 CACNA2D4Q7Z3S7 1137 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 CBWD2Q8IUF1 395 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 ADGRF2Q8IZF7 708 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 FMR1NBQ8N0W7 255 aaPredicted RBP6.2□□□□□ -1.42
USP3-215ENST00000559771 CAMKK1Q8N5S9 505 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 ARL14EPQ8N8R7 260 aaPredicted RBP6.2□□□□□ -1.42
USP3-215ENST00000559771 RASSF8Q8NHQ8 419 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 RPLP0P6Q8NHW5 317 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 SPATA18Q8TC71 538 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 USP33Q8TEY7 942 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 MRPS31Q92665 395 aaKnown RBP6.2□□□□□ -1.42
USP3-215ENST00000559771 MYLPFQ96A32 169 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 FUBP3Q96I24 572 aaKnown RBP eCLIP6.2□□□□□ -1.42
USP3-215ENST00000559771 P2RY13Q9BPV8 354 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 TTLL2Q9BWV7 592 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 RNF38Q9H0F5 515 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 TMEM206Q9H813 350 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 PANK4Q9NVE7 773 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 DUS2Q9NX74 493 aaKnown RBP6.2□□□□□ -1.42
USP3-215ENST00000559771 CHMP5Q9NZZ3 219 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 EBF1Q9UH73 591 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 ITGA11Q9UKX5 1188 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 ARHGAP26Q9UNA1 814 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 WASF3Q9UPY6 502 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 MTMR6Q9Y217 621 aa6.2□□□□□ -1.42
USP3-215ENST00000559771 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.2□□□□□ -1.42
USP3-215ENST00000559771 PLXND1Q9Y4D7 1925 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 CACNA1BQ00975 2339 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 CHD6Q8TD26 2715 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 TRAV19A0A0A6YYK7 116 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 ATG13O75143 517 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 LDHAP00338 332 aaKnown RBP6.19□□□□□ -1.42
USP3-215ENST00000559771 KRT19P08727 400 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 USP17L7P0C7H9 530 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 IDEP14735 1019 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 BCKDHBP21953 392 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 WARSP23381 471 aaKnown RBP6.19□□□□□ -1.42
USP3-215ENST00000559771 BDNFP23560 247 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 MPLP40238 635 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 LHX1P48742 406 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 RPL10AP62906 217 aaKnown RBP6.19□□□□□ -1.42
USP3-215ENST00000559771 MYL7Q01449 175 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 EHHADHQ08426 723 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 DMC1Q14565 340 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 FBXO43Q4G163 708 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 DPH6Q7L8W6 267 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 RASSF3Q86WH2 238 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 C12orf40Q86WS4 652 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 SPATA2LQ8IUW3 424 aaPredicted RBP6.19□□□□□ -1.42
USP3-215ENST00000559771 SCN4BQ8IWT1 228 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 ADGRG2Q8IZP9 1017 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 GPD1LQ8N335 351 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 PHTF2Q8N3S3 785 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 CPA6Q8N4T0 437 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 C1orf216Q8TAB5 229 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 PLEKHO2Q8TD55 490 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 SH3RF2Q8TEC5 729 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms