RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CDK5RAP1Q96SZ6 601 aaKnown RBP8.61□□□□□ -1.03
SNX1-207ENST00000559401 SEMA4AQ9H3S1 761 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 THAP9Q9H5L6 903 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 FBRSL1Q9HCM7 1045 aaKnown RBP8.61□□□□□ -1.03
SNX1-207ENST00000559401 CYLDQ9NQC7 956 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.61□□□□□ -1.03
SNX1-207ENST00000559401 OSER1Q9NX31 292 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 ZSCAN32Q9NX65 697 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 DNMT3LQ9UJW3 386 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 KIAA1257Q9ULG3 409 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 STRIP2Q9ULQ0 834 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 SLC8A2Q9UPR5 921 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 PCDHGA2Q9Y5H1 932 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 CHURC1-FNTBB4DL54 471 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 NEDD8-MDP1E9PL57 170 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 RNF225M0QZC1 329 aaPredicted RBP8.6□□□□□ -1.03
SNX1-207ENST00000559401 APODP05090 189 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 SLC9A1P19634 815 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 ERCC5P28715 1186 aaPredicted RBP8.6□□□□□ -1.03
SNX1-207ENST00000559401 OPRD1P41143 372 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 PLA2G4AP47712 749 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 SLC6A11P48066 632 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 FNTBP49356 437 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 GAD2Q05329 585 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 STILQ15468 1287 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 MAN2A1Q16706 1144 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 EXOC3L4Q17RC7 722 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 FBXO43Q4G163 708 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 C2orf27AQ580R0 203 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 RAB41Q5JT25 222 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 LY6G5CQ5SRR4 150 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 GJB7Q6PEY0 223 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 TRIM65Q6PJ69 517 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 RHBDF2Q6PJF5 856 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 SASS6Q6UVJ0 657 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 LCLAT1Q6UWP7 414 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 PRR23BQ6ZRT6 265 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 TPGS1Q6ZTW0 290 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 ADGRG2Q8IZP9 1017 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 KIAA1958Q8N8K9 716 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 NAT16Q8N8M0 369 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 RPLP0P6Q8NHW5 317 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 GPT2Q8TD30 523 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 RNF139Q8WU17 664 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 TFAP2BQ92481 460 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 NDRG1Q92597 394 aaKnown RBP8.6□□□□□ -1.03
SNX1-207ENST00000559401 GOLGA1Q92805 767 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 SECISBP2LQ93073 1101 aaKnown RBP8.6□□□□□ -1.03
SNX1-207ENST00000559401 WBP2Q969T9 261 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 ACDQ96AP0 544 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 KREMEN1Q96MU8 473 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 MED15Q96RN5 788 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 KLF16Q9BXK1 252 aaPredicted RBP8.6□□□□□ -1.03
SNX1-207ENST00000559401 FAM126AQ9BYI3 521 aaPredicted RBP8.6□□□□□ -1.03
SNX1-207ENST00000559401 UBXN6Q9BZV1 441 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 ARHGEF4Q9NR80 690 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 SPHK2Q9NRA0 654 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 ST7Q9NRC1 585 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 C2orf42Q9NWW7 574 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 CLIC5Q9NZA1 410 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 NCDNQ9UBB6 729 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 RAB23Q9ULC3 237 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.6□□□□□ -1.03
SNX1-207ENST00000559401 USP3Q9Y6I4 520 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 PIEZO1Q92508 2521 aa8.6□□□□□ -1.03
SNX1-207ENST00000559401 ZFHX2Q9C0A1 2572 aaPredicted RBP8.6□□□□□ -1.03
SNX1-207ENST00000559401 SLC12A8A0AV02 714 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.59□□□□□ -1.03
SNX1-207ENST00000559401 KCNJ18B7U540 433 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 THAP12O43422 761 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 MED7O43513 233 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 LETM1O95202 739 aaPredicted RBP8.59□□□□□ -1.03
SNX1-207ENST00000559401 MBD3O95983 291 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 GNA15P30679 374 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 PXNP49023 591 aaPredicted RBP8.59□□□□□ -1.03
SNX1-207ENST00000559401 COG7P83436 770 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 APBA1Q02410 837 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 DMWDQ09019 674 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 KCNJ12Q14500 433 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 CNGA2Q16280 664 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 LPAL2Q16609 132 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 KLHDC10Q6PID8 442 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 HTR3DQ70Z44 454 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 CEP68Q76N32 757 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 ENOSF1Q7L5Y1 443 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 C12orf40Q86WS4 652 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 IRF2BP1Q8IU81 584 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 ZBTB44Q8NCP5 570 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 CCDC26Q8TAB7 109 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 EDEM1Q92611 657 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 BHMTQ93088 406 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 FAM81BQ96LP2 452 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 HHIPQ96QV1 700 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 PNKPQ96T60 521 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 TUBGCP2Q9BSJ2 902 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 BBS2Q9BXC9 721 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 MIS12Q9H081 205 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 NDST4Q9H3R1 872 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 OLA1Q9NTK5 396 aaKnown RBP8.59□□□□□ -1.03
SNX1-207ENST00000559401 POLR3BQ9NW08 1133 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms