RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 GRM2Q14416 872 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 ZNF77Q15935 545 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 BSPRYQ5W0U4 402 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 TMEM139Q8IV31 216 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 SPC24Q8NBT2 197 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 TMEM35BQ8NCS4 154 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 PDZD8Q8NEN9 1154 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 JOSD2Q8TAC2 188 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 MRPS31Q92665 395 aaKnown RBP11.43□□□□□ -0.58
TPM1-217ENST00000559108 SMARCD2Q92925 531 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 ANP32EQ9BTT0 268 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 SLITRK6Q9H5Y7 841 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 KCNK12Q9HB15 430 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 TRPV4Q9HBA0 871 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 GKN1Q9NS71 199 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 NAALADL1Q9UQQ1 740 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 KIAA1549LQ6ZVL6 1849 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 TTC28Q96AY4 2481 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 TRAV19A0A0A6YYK7 116 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 HEPACAM2A8MVW5 462 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 AKR1B15C9JRZ8 316 aaPredicted RBP11.42□□□□□ -0.58
TPM1-217ENST00000559108 LTFP02788 710 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 HDCP19113 662 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 FECHP22830 423 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 FLT3P36888 993 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 TUBP50607 506 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 SLC8A3P57103 927 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 SLC7A9P82251 487 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 GFPT1Q06210 699 aaPredicted RBP11.42□□□□□ -0.58
TPM1-217ENST00000559108 TRIM14Q14142 442 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 HECTD3Q5T447 861 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 ACAD10Q6JQN1 1059 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 TRIM72Q6ZMU5 477 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 PHF13Q86YI8 300 aaPredicted RBP11.42□□□□□ -0.58
TPM1-217ENST00000559108 RNF135Q8IUD6 432 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 OR8K1Q8NGG5 319 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 ADAM32Q8TC27 787 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 DQX1Q8TE96 717 aaKnown RBP11.42□□□□□ -0.58
TPM1-217ENST00000559108 IQCDQ96DY2 449 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 CHFRQ96EP1 664 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 ZFYVE19Q96K21 471 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 GCNAQ96QF7 691 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 KLF16Q9BXK1 252 aaPredicted RBP11.42□□□□□ -0.58
TPM1-217ENST00000559108 PACSIN1Q9BY11 444 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 PDCL3Q9H2J4 239 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 TLR8Q9NR97 1041 aaKnown RBP11.42□□□□□ -0.58
TPM1-217ENST00000559108 SEPT11Q9NVA2 429 aaKnown RBP11.42□□□□□ -0.58
TPM1-217ENST00000559108 CLIC5Q9NZA1 410 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 MUTYHQ9UIF7 546 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 TMEM59LQ9UK28 342 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 CPQQ9Y646 472 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 BDP1A6H8Y1 2624 aa11.42□□□□□ -0.58
TPM1-217ENST00000559108 MUC3AQ02505 3323 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 OTOL1A6NHN0 477 aaPredicted RBP11.41□□□□□ -0.58
TPM1-217ENST00000559108 SHISA7A6NL88 538 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 GOLGA8SH3BPF8 625 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 I6L893 689 aaPredicted RBP11.41□□□□□ -0.58
TPM1-217ENST00000559108 ARNTLO00327 626 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 IGLV3-25P01717 112 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 KLKB1P03952 638 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 CKMP06732 381 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 TNFAIP3P21580 790 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 RRM1P23921 792 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 WEE1P30291 646 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 ACADSBP45954 432 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 SLC6A3Q01959 620 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 OGDHQ02218 1023 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 EFEMP1Q12805 493 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 EIF4EBP2Q13542 120 aaPredicted RBP11.41□□□□□ -0.58
TPM1-217ENST00000559108 MTF1Q14872 753 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 ARHGAP15Q53QZ3 475 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 TDRD12Q587J7 1177 aaKnown RBP11.41□□□□□ -0.58
TPM1-217ENST00000559108 PPP1R15BQ5SWA1 713 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 OR6B2Q6IFH4 312 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 MSANTD2Q6P1R3 559 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 SLC26A9Q7LBE3 791 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 TAC4Q86UU9 113 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 ERICH1Q86X53 443 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 MCOLN2Q8IZK6 566 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 DEFB106AQ8N104 65 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 GJD3Q8N144 294 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 SLC44A3Q8N4M1 653 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 EMC1Q8N766 993 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 SH3RF2Q8TEC5 729 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 IRGQQ8WZA9 623 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 C18orf8Q96DM3 657 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 SLC2A13Q96QE2 648 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 UHRF1Q96T88 793 aaPredicted RBP11.41□□□□□ -0.58
TPM1-217ENST00000559108 COL25A1Q9BXS0 654 aaPredicted RBP11.41□□□□□ -0.58
TPM1-217ENST00000559108 TRIM7Q9C029 511 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 ANLNQ9NQW6 1124 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 SPTLC3Q9NUV7 552 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 EHD2Q9NZN4 543 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 ADAMTS1Q9UHI8 967 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 SFMBT1Q9UHJ3 866 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 ARHGAP26Q9UNA1 814 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 FAM50BQ9Y247 325 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 NR2E1Q9Y466 385 aa11.41□□□□□ -0.58
TPM1-217ENST00000559108 NCOR1O75376 2440 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 GOLGA6L3A6NEY3 463 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms