RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 PRDM8Q9NQV8 689 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 ITM2CQ9NQX7 267 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 TMLHEQ9NVH6 421 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 SAGE1Q9NXZ1 904 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 RRN3Q9NYV6 651 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 NKX1-2Q9UD57 310 aaPredicted RBP5.08□□□□□ -1.6
CASC4-206ENST00000558847 STEAP1Q9UHE8 339 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 C19orf53Q9UNZ5 99 aaPredicted RBP5.08□□□□□ -1.6
CASC4-206ENST00000558847 SH2B3Q9UQQ2 575 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 EIF3FO00303 357 aaPredicted RBP5.07□□□□□ -1.6
CASC4-206ENST00000558847 KIAA0355O15063 1070 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 NDUFA10O95299 355 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 HGFP14210 728 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 KRT4P19013 534 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 AARSP49588 968 aaKnown RBP eCLIP5.07□□□□□ -1.6
CASC4-206ENST00000558847 DGKQP52824 942 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 GUCY1B3Q02153 619 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 PTCHD3Q3KNS1 767 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 TRIM60Q495X7 471 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 TIGD2Q4W5G0 525 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 ZNF618Q5T7W0 954 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 DEPDC1Q5TB30 811 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 VPS53Q5VIR6 699 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 LIN54Q6MZP7 749 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 RINT1Q6NUQ1 792 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 FTSJ3Q8IY81 847 aaKnown RBP5.07□□□□□ -1.6
CASC4-206ENST00000558847 NAXEQ8NCW5 288 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 IL17REQ8NFR9 667 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 ATG4AQ8WYN0 398 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 OVCA2Q8WZ82 227 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 PGBD1Q96JS3 809 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 PPM1MQ96MI6 270 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 WDR24Q96S15 920 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 UNC45AQ9H3U1 944 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 NDUFAF4Q9P032 175 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 SRP68Q9UHB9 627 aaKnown RBP5.07□□□□□ -1.6
CASC4-206ENST00000558847 SLC13A4Q9UKG4 626 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 SSX2IPQ9Y2D8 614 aa5.07□□□□□ -1.6
CASC4-206ENST00000558847 CCDC196A0A1B0GTZ2 297 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 A0A1B0GVC2 190 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 GRID2IPA4D2P6 1211 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 J3KTA2 159 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 FOXN1O15353 648 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 PROM1O43490 865 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 DNPH1O43598 174 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 LARGE1O95461 756 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 PRKCBP05771 671 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 ATXN1P54253 815 aaKnown RBP5.06□□□□□ -1.6
CASC4-206ENST00000558847 TIRAPP58753 221 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 ACTR2P61160 394 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 TAF5Q15542 800 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 TBRG1Q3YBR2 411 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 DENND2CQ68D51 928 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 PCSK4Q6UW60 755 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 MOGAT3Q86VF5 341 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 C2CD5Q86YS7 1000 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 PROKR1Q8TCW9 393 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 TMEM171Q8WVE6 324 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 NACC2Q96BF6 587 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 PTCD3Q96EY7 689 aaKnown RBP5.06□□□□□ -1.6
CASC4-206ENST00000558847 VPS50Q96JG6 964 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 EIF3CQ99613 913 aaKnown RBP5.06□□□□□ -1.6
CASC4-206ENST00000558847 C17orf80Q9BSJ5 609 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 ZHX3Q9H4I2 956 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 RASSF1Q9NS23 344 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 RXFP3Q9NSD7 469 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 DRG1Q9Y295 367 aaKnown RBP5.06□□□□□ -1.6
CASC4-206ENST00000558847 MAP3K2Q9Y2U5 619 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 SNX14Q9Y5W7 946 aa5.06□□□□□ -1.6
CASC4-206ENST00000558847 RRN3P2A6NIE6 340 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 UNC119BA6NIH7 251 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 A8MVJ9 347 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 ZFPL1O95159 310 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 SPDEFO95238 335 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 TK1P04183 234 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 DLDP09622 509 aaKnown RBP5.05□□□□□ -1.6
CASC4-206ENST00000558847 PPP3CBP16298 524 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 XBP1P17861 261 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 GATA3P23771 443 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 ADORA2AP29274 412 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 AKT1P31749 480 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 GSTM5P46439 218 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 TLE2Q04725 743 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 NBPF8Q3BBV2 869 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 INTS11Q5TA45 600 aaKnown RBP5.05□□□□□ -1.6
CASC4-206ENST00000558847 KCNV1Q6PIU1 500 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 CLEC9AQ6UXN8 241 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 ARHGEF19Q8IW93 802 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 LNX2Q8N448 690 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 SUN3Q8TAQ9 357 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 SOCS4Q8WXH5 440 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 FKBP10Q96AY3 582 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 TRAPPC9Q96Q05 1148 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 BRD8Q9H0E9 1235 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 TAF1DQ9H5J8 278 aaPredicted RBP5.05□□□□□ -1.6
CASC4-206ENST00000558847 ELAC1Q9H777 363 aaKnown RBP5.05□□□□□ -1.6
CASC4-206ENST00000558847 TESQ9UGI8 421 aaKnown RBP5.05□□□□□ -1.6
CASC4-206ENST00000558847 SCAF8Q9UPN6 1271 aaKnown RBP5.05□□□□□ -1.6
CASC4-206ENST00000558847 SLC27A6Q9Y2P4 619 aa5.05□□□□□ -1.6
CASC4-206ENST00000558847 PPM1DO15297 605 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms