RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 ETFBKMTQ8IXQ9 262 aa16.25■□□□□ 0.19
CPNE6-208ENST00000558795 RDH13Q8NBN7 331 aa16.25■□□□□ 0.19
CPNE6-208ENST00000558795 B3GALNT2Q8NCR0 500 aa16.25■□□□□ 0.19
CPNE6-208ENST00000558795 B3GNT5Q9BYG0 378 aa16.25■□□□□ 0.19
CPNE6-208ENST00000558795 LRRC27Q9C0I9 530 aa16.25■□□□□ 0.19
CPNE6-208ENST00000558795 CHORDC1Q9UHD1 332 aaPredicted RBP16.25■□□□□ 0.19
CPNE6-208ENST00000558795 NME7Q9Y5B8 376 aa16.25■□□□□ 0.19
CPNE6-208ENST00000558795 PCDH15Q96QU1 1955 aa16.25■□□□□ 0.19
CPNE6-208ENST00000558795 IGHV1OR15-9A0A0B4J2B8 117 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 CLSTN1O94985 981 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 ZNF202O95125 648 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 CST3P01034 146 aaPredicted RBP16.24■□□□□ 0.19
CPNE6-208ENST00000558795 IRF1P10914 325 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 FAM193AP78312 1265 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 TRPC3Q13507 836 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 E2F4Q16254 413 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 SNRNP35Q16560 246 aaKnown RBP16.24■□□□□ 0.19
CPNE6-208ENST00000558795 GRAMD4Q6IC98 578 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 CHPFQ8IZ52 775 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 RGL4Q8IZJ4 473 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 OR2I1PQ8NGU4 316 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 ZFRQ96KR1 1074 aaKnown RBP16.24■□□□□ 0.19
CPNE6-208ENST00000558795 HSPA12BQ96MM6 686 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 MED10Q9BTT4 135 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 TNMDQ9H2S6 317 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 GOLPH3LQ9H4A5 285 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 LMBRD1Q9NUN5 540 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 DNAJC17Q9NVM6 304 aaKnown RBP16.24■□□□□ 0.19
CPNE6-208ENST00000558795 NXF1Q9UBU9 619 aaKnown RBP16.24■□□□□ 0.19
CPNE6-208ENST00000558795 CYP8B1Q9UNU6 501 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 PCDHB9Q9Y5E1 797 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 SPEGQ15772 3267 aa16.24■□□□□ 0.19
CPNE6-208ENST00000558795 NDUFS2O75306 463 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 SLFN14P0C7P3 912 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 CD59P13987 128 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 TUBP50607 506 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 RAB44Q7Z6P3 723 aaPredicted RBP16.23■□□□□ 0.19
CPNE6-208ENST00000558795 PROSER1Q86XN7 944 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 TMEM25Q86YD3 366 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 SLC41A1Q8IVJ1 513 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 FMR1NBQ8N0W7 255 aaPredicted RBP16.23■□□□□ 0.19
CPNE6-208ENST00000558795 TRIML1Q8N9V2 468 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 GLIS3Q8NEA6 775 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 SCFD1Q8WVM8 642 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 HPS3Q969F9 1004 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 CCDC127Q96BQ5 260 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 KCNK16Q96T55 309 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 CGRRF1Q99675 332 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 CCSER2Q9H7U1 834 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 DMAP1Q9NPF5 467 aaPredicted RBP16.23■□□□□ 0.19
CPNE6-208ENST00000558795 DNAAF2Q9NVR5 837 aaKnown RBP16.23■□□□□ 0.19
CPNE6-208ENST00000558795 SUSD2Q9UGT4 822 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 STARD13Q9Y3M8 1113 aa16.23■□□□□ 0.19
CPNE6-208ENST00000558795 ASPMQ8IZT6 3477 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 A0A1W2PQF6 199 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 FAM221BA6H8Z2 402 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 PHACTR2O75167 634 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 NDUFV2P19404 249 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 PTMSP20962 102 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 SLC5A3P53794 718 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 SLC14A1Q13336 389 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 PSMD6Q15008 389 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 TRIP6Q15654 476 aaKnown RBP16.22■□□□□ 0.19
CPNE6-208ENST00000558795 PLEKHG6Q3KR16 790 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 SYCP2LQ5T4T6 812 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 SNX30Q5VWJ9 437 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 EGFLAMQ63HQ2 1017 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 FAM35AQ86V20 835 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 MIB1Q86YT6 1006 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 ENGASEQ8NFI3 743 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 SCAMP5Q8TAC9 235 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 IPO4Q8TEX9 1081 aaKnown RBP16.22■□□□□ 0.19
CPNE6-208ENST00000558795 ERLEC1Q96DZ1 483 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 XPO6Q96QU8 1125 aaKnown RBP16.22■□□□□ 0.19
CPNE6-208ENST00000558795 DUSP9Q99956 384 aaKnown RBP16.22■□□□□ 0.19
CPNE6-208ENST00000558795 FAM124BQ9H5Z6 455 aaPredicted RBP16.22■□□□□ 0.19
CPNE6-208ENST00000558795 KBTBD4Q9NVX7 518 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 GMIPQ9P107 970 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 SERTAD1Q9UHV2 236 aa16.22■□□□□ 0.19
CPNE6-208ENST00000558795 NEDD8-MDP1E9PL57 170 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 TRIM24O15164 1050 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 EIF3DO15371 548 aaKnown RBP eCLIP16.21■□□□□ 0.19
CPNE6-208ENST00000558795 ACTN4O43707 911 aaKnown RBP16.21■□□□□ 0.19
CPNE6-208ENST00000558795 SH3BP5O60239 455 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 STAU1O95793 577 aaKnown RBP16.21■□□□□ 0.19
CPNE6-208ENST00000558795 GNSP15586 552 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 ATICP31939 592 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 CYP2J2P51589 502 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 MYL6P60660 151 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 CYP24A1Q07973 514 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 XXYLT1Q8NBI6 393 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 FOXJ1Q92949 421 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 SYAP1Q96A49 352 aaPredicted RBP16.21■□□□□ 0.19
CPNE6-208ENST00000558795 SMARCD1Q96GM5 515 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 TNIP3Q96KP6 325 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 TIGD1Q96MW7 591 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 CAMK1GQ96NX5 476 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 ACOX2Q99424 681 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 BBS2Q9BXC9 721 aa16.21■□□□□ 0.19
CPNE6-208ENST00000558795 AGPAT3Q9NRZ7 376 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms