RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	YEATS4	O95619	227 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	CSH1	P0DML2	217 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	CSH2	P0DML3	217 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	TGM1	P22735	817 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	BDNF	P23560	247 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	WEE1	P30291	646 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	ME1	P48163	572 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	LHX1	P48742	406 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	CASP4	P49662	377 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	CCR3	P51677	355 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	MLLT6	P55198	1093 aa	Predicted RBP	7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	RPL10A	P62906	217 aa	Known RBP	7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	AMPD3	Q01432	767 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	CYP27A1	Q02318	531 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	DNM1	Q05193	864 aa	Known RBP	7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	SMARCB1	Q12824	385 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	MYO1E	Q12965	1108 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	RUNX3	Q13761	415 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	LRRC32	Q14392	662 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	SNRNP35	Q16560	246 aa	Known RBP	7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	MDH1B	Q5I0G3	518 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	NKAPL	Q5M9Q1	402 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	FSTL4	Q6MZW2	842 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	PSAPL1	Q6NUJ1	521 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	FAM171B	Q6P995	826 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	PRR23B	Q6ZRT6	265 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	STXBP4	Q6ZWJ1	553 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	TRAPPC11	Q7Z392	1133 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	LIMS2	Q7Z4I7	341 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	TMEM86A	Q8N2M4	240 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	SPEM1	Q8N4L4	309 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	TOP6BL	Q8N6T0	577 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	ARL14EP	Q8N8R7	260 aa	Predicted RBP	7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	IQUB	Q8NA54	791 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	PLEKHO2	Q8TD55	490 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	MRPS31	Q92665	395 aa	Known RBP	7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	MYLPF	Q96A32	169 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	MMS19	Q96T76	1030 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	ARID3A	Q99856	593 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	SYT15	Q9BQS2	421 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	LRRC27	Q9C0I9	530 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	LINC00597	Q9H2U6	94 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	DMGDH	Q9UI17	866 aa	Known RBP	7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	USP18	Q9UMW8	372 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	R3HCC1	Q9Y3T6	440 aa	Known RBP	7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	WNT6	Q9Y6F9	365 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	KIF26A	Q9ULI4	1882 aa	Predicted RBP	7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	ATG2B	Q96BY7	2078 aa		7.47	□□□□□ -1.21
MARK3-215	ENST00000558787	ANTXRL	A6NF34	631 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	CLDN5	O00501	218 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	SCAMP3	O14828	347 aa	Known RBP	7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	F13A1	P00488	732 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	EGF	P01133	1207 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	TNNI1	P19237	187 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	WARS	P23381	471 aa	Known RBP	7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	ITGB7	P26010	798 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	PCSK1	P29120	753 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	GNL1	P36915	607 aa	Predicted RBP	7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	GRIK1	P39086	918 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	GALK1	P51570	392 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	CACNA2D1	P54289	1103 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	NRL	P54845	237 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	CDH8	P55286	799 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	MYL6	P60660	151 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	NRG1	Q02297	640 aa	Predicted RBP	7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	CYP24A1	Q07973	514 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	EHHADH	Q08426	723 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	SIM2	Q14190	667 aa	Predicted RBP	7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	PSMD6	Q15008	389 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	CFAP221	Q4G0U5	840 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	DGKK	Q5KSL6	1271 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	RESP18	Q5W5W9	173 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	CNNM4	Q6P4Q7	775 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	UNC13D	Q70J99	1090 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	DGLUCY	Q7Z3D6	616 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	WDR49	Q8IV35	697 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	XXYLT1	Q8NBI6	393 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	OR6B3	Q8NGW1	331 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	LEO1	Q8WVC0	666 aa	Predicted RBP	7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	TRMT2B	Q96GJ1	504 aa	Known RBP	7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	CGRRF1	Q99675	332 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	FAM126A	Q9BYI3	521 aa	Predicted RBP	7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	SNX25	Q9H3E2	840 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	CUEDC2	Q9H467	287 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	DPEP3	Q9H4B8	488 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	ABCB6	Q9NP58	842 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	TMEM30A	Q9NV96	361 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	DUS2	Q9NX74	493 aa	Known RBP	7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	GCNT4	Q9P109	453 aa		7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	MAGEC2	Q9UBF1	373 aa	Predicted RBP	7.46	□□□□□ -1.22
MARK3-215	ENST00000558787	NUP210	Q8TEM1	1887 aa	Predicted RBP	7.45	□□□□□ -1.22
MARK3-215	ENST00000558787	TRAV19	A0A0A6YYK7	116 aa		7.45	□□□□□ -1.22
MARK3-215	ENST00000558787	KIAA0391	O15091	583 aa	Known RBP	7.45	□□□□□ -1.22
MARK3-215	ENST00000558787	EIF3D	O15371	548 aa	Known RBP eCLIP	7.45	□□□□□ -1.22
MARK3-215	ENST00000558787	KLRC4	O43908	158 aa		7.45	□□□□□ -1.22
MARK3-215	ENST00000558787	EXOC3	O60645	756 aa		7.45	□□□□□ -1.22
MARK3-215	ENST00000558787	ABL1	P00519	1130 aa		7.45	□□□□□ -1.22
MARK3-215	ENST00000558787	CKM	P06732	381 aa		7.45	□□□□□ -1.22
MARK3-215	ENST00000558787	USP17L7	P0C7H9	530 aa		7.45	□□□□□ -1.22

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