RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 CAPN7Q9Y6W3 813 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 A0A0U1RQF3 1178 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 APOL1O14791 398 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 CAND2O75155 1236 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 SETSIPP0DME0 302 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 SRGAP2BP0DMP2 458 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 VCPP55072 806 aaKnown RBP11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 YWHAZP63104 245 aaKnown RBP11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 PDIA2Q13087 525 aaKnown RBP11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 ARHGEF6Q15052 776 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 SYPL2Q5VXT5 272 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 SPATA2LQ8IUW3 424 aaPredicted RBP11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 UNC45BQ8IWX7 931 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 IQCKQ8N0W5 287 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 NEU2Q9Y3R4 380 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 TCRBV5S1A1TA0A578 114 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 RASGRF2O14827 1237 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 CPB1P15086 417 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 CACNA2D1P54289 1103 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 YWHAHQ04917 246 aaPredicted RBP11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 TFDP2Q14188 446 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 SLC39A12Q504Y0 691 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 KIAA0319Q5VV43 1072 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 RWDD4Q6NW29 188 aaKnown RBP11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 CLEC20AQ6ZU45 233 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 OTUD6BQ8N6M0 293 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 TOP6BLQ8N6T0 577 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 ATP6V1G3Q96LB4 118 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 DUSP16Q9BY84 665 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 PABPC3Q9H361 631 aaKnown RBP11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 CHST12Q9NRB3 414 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 DNAJB4Q9UDY4 337 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 STAP1Q9ULZ2 295 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 TRPM7Q96QT4 1865 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 MYO7AQ13402 2215 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 MGAMO43451 1857 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 YJEFN3A6XGL0 299 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 E7ENQ6 273 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 ITIH2P19823 946 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 LHX1P48742 406 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 CTCFP49711 727 aaPredicted RBP11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 PTK7Q13308 1070 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 SLMAPQ14BN4 828 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 EP400NLQ6ZTU2 488 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 GPRIN1Q7Z2K8 1008 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 ECHDC2Q86YB7 292 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 KLHDC9Q8NEP7 349 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 MDM1Q8TC05 714 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 FAF2Q96CS3 445 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 RAB6BQ9NRW1 208 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 ZDHHC18Q9NUE0 388 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 CTNNAL1Q9UBT7 734 aa11.26□□□□□ -0.61
CSPG4P5-201ENST00000558731 NDUFAB1O14561 156 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 GABBR2O75899 941 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 GOT1P17174 413 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 CYP2F1P24903 491 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 AARSP49588 968 aaKnown RBP eCLIP11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 HDAC4P56524 1084 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 GAD2Q05329 585 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 AP1B1Q10567 949 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 KLF1Q13351 362 aaPredicted RBP11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 TUSC3Q13454 348 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 CASC4Q6P4E1 433 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 CCDC13Q8IYE1 715 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 SCAMP5Q8TAC9 235 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 PIK3R5Q8WYR1 880 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 ATP11BQ9Y2G3 1177 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 SNX10Q9Y5X0 201 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 FAM169AQ9Y6X4 670 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 NRP1O14786 923 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 SOAT2O75908 522 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 APRTP07741 180 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 ACADSBP45954 432 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 RAB27AP51159 221 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 BOLA3Q53S33 107 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 EFHC1Q5JVL4 640 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 LRRC38Q5VT99 294 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 CCDC110Q8TBZ0 833 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 SLC4A5Q9BY07 1137 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 UPF3AQ9H1J1 476 aaKnown RBP11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 GDAP2Q9NXN4 497 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 MFHAS1Q9Y4C4 1052 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 PCDHB7Q9Y5E2 793 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 MAD1L1Q9Y6D9 718 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 PRRC2BQ5JSZ5 2229 aaKnown RBP11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 PTK6Q13882 451 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 FASTKD3Q14CZ7 662 aaKnown RBP11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 TMED2Q15363 201 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 CYP1B1Q16678 543 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 FAM171A1Q5VUB5 890 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 PPP1R21Q6ZMI0 780 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 LRRC8DQ7L1W4 858 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 TMEM110Q86TL2 294 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 CRYBG2Q8N1P7 616 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 SEPT5Q99719 369 aaPredicted RBP11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 CXorf56Q9H5V9 222 aa11.25□□□□□ -0.61
CSPG4P5-201ENST00000558731 CABYRO75952 493 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 STAU1O95793 577 aaKnown RBP11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 HMBSP08397 361 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms