RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 A0A1W2PQC6 194 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 YJEFN3A6XGL0 299 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 E7ENQ6 273 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 FBXO21O94952 628 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 IRF1P10914 325 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 RPL34P49207 117 aaKnown RBP12.96□□□□□ -0.33
SMAD3-205ENST00000558428 KPNA1P52294 538 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-205ENST00000558428 ZNF445P59923 1031 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 PDCLQ13371 301 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 NR1I3Q14994 352 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 BSPRYQ5W0U4 402 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 KLHDC10Q6PID8 442 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 TPRG1Q6ZUI0 275 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 RSRC2Q7L4I2 434 aaKnown RBP12.96□□□□□ -0.33
SMAD3-205ENST00000558428 NOP9Q86U38 636 aaKnown RBP12.96□□□□□ -0.33
SMAD3-205ENST00000558428 SUGP1Q8IWZ8 645 aaKnown RBP12.96□□□□□ -0.33
SMAD3-205ENST00000558428 FBXL6Q8N531 539 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 ZNF276Q8N554 614 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 WDTC1Q8N5D0 677 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 RNF214Q8ND24 703 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 C1orf131Q8NDD1 294 aaKnown RBP12.96□□□□□ -0.33
SMAD3-205ENST00000558428 TTC8Q8TAM2 541 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 EPS8L1Q8TE68 723 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 CLEC4CQ8WTT0 213 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 OSCP1Q8WVF1 389 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 IRGQQ8WZA9 623 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 NOX5Q96PH1 765 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 FAM83CQ9BQN1 747 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 SLC4A5Q9BY07 1137 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 LHX5Q9H2C1 402 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 EBF3Q9H4W6 596 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 TBC1D17Q9HA65 648 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 GTSE1Q9NYZ3 720 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 RASAL2Q9UJF2 1139 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 DNMT3LQ9UJW3 386 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 SH3BP1Q9Y3L3 701 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 WNT6Q9Y6F9 365 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 PIAS3Q9Y6X2 628 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 ZNF318Q5VUA4 2279 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 E5RJQ4 531 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 SCAMP3O14828 347 aaKnown RBP12.95□□□□□ -0.34
SMAD3-205ENST00000558428 MMEP08473 750 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 ARSAP15289 507 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 STARD6P59095 220 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 GOLGA8FQ08AF8 430 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 GOLGA8DPQ0D2H9 430 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 EFEMP1Q12805 493 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 RUNX3Q13761 415 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 PDGFRLQ15198 375 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 ITPRIPL2Q3MIP1 535 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 CWF19L1Q69YN2 538 aaKnown RBP12.95□□□□□ -0.34
SMAD3-205ENST00000558428 TMEM110Q86TL2 294 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 MIB1Q86YT6 1006 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 SCUBE3Q8IX30 993 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 RNF139Q8WU17 664 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 DDX1Q92499 740 aaKnown RBP12.95□□□□□ -0.34
SMAD3-205ENST00000558428 EDEM1Q92611 657 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 GOLGA1Q92805 767 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 ATP2A3Q93084 1043 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 FAM149B1Q96BN6 582 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 PPP1R13BQ96KQ4 1090 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 CPXM1Q96SM3 734 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 KLF16Q9BXK1 252 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-205ENST00000558428 HPS4Q9NQG7 708 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 ABCC13Q9NSE7 274 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 OLA1Q9NTK5 396 aaKnown RBP12.95□□□□□ -0.34
SMAD3-205ENST00000558428 TJP2Q9UDY2 1190 aa12.95□□□□□ -0.34
SMAD3-205ENST00000558428 E2F8A0AVK6 867 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 SLC9A3R1O14745 358 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-205ENST00000558428 PAPSS1O43252 624 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-205ENST00000558428 SART1O43290 800 aaKnown RBP12.94□□□□□ -0.34
SMAD3-205ENST00000558428 LTFP02788 710 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 GLULP15104 373 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 CD72P21854 359 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 SOX9P48436 509 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 ARID5AQ03989 594 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 UBXN2BQ14CS0 331 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 EML3Q32P44 896 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 ASTLQ6HA08 431 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-205ENST00000558428 ZNF677Q86XU0 584 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 CPA6Q8N4T0 437 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 KIAA1958Q8N8K9 716 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 TMEM35BQ8NCS4 154 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 IPO4Q8TEX9 1081 aaKnown RBP12.94□□□□□ -0.34
SMAD3-205ENST00000558428 SLC20A1Q8WUM9 679 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 FOXQ1Q9C009 403 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 LINC00597Q9H2U6 94 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 SYNCQ9H7C4 482 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 C8orf33Q9H7E9 229 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-205ENST00000558428 ECT2Q9H8V3 914 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 MARCH2Q9P0N8 246 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 IFNKQ9P0W0 207 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 NOCTQ9UK39 431 aaKnown RBP12.94□□□□□ -0.34
SMAD3-205ENST00000558428 LSM7Q9UK45 103 aaKnown RBP12.94□□□□□ -0.34
SMAD3-205ENST00000558428 STRIP2Q9ULQ0 834 aa12.94□□□□□ -0.34
SMAD3-205ENST00000558428 KANSL1LA0AUZ9 987 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 SLC12A8A0AV02 714 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 FAM170AA1A519 330 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 OTOL1A6NHN0 477 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-205ENST00000558428 SPECC1L-ADORA2AF8WAN1 911 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms