RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 CPT1AP50416 773 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 ZNF135P52742 658 aaPredicted RBP8.66□□□□□ -1.02
SPG11-209ENST00000558253 CRYBB1P53674 252 aaPredicted RBP8.66□□□□□ -1.02
SPG11-209ENST00000558253 BCAR1P56945 870 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 GUCA2AQ02747 115 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 BST2Q10589 180 aaKnown RBP8.66□□□□□ -1.02
SPG11-209ENST00000558253 RIPK1Q13546 671 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 SETDB1Q15047 1291 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 TMED2Q15363 201 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 PDK4Q16654 411 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 CCDC14Q49A88 953 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 MAP1SQ66K74 1059 aaPredicted RBP8.66□□□□□ -1.02
SPG11-209ENST00000558253 NUGGCQ68CJ6 796 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 TXNRD3NBQ6F5E7 133 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 OLFML1Q6UWY5 402 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 RNF19BQ6ZMZ0 732 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 Q6ZNB5 142 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 C3orf62Q6ZUJ4 267 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 FAM183BPQ6ZVS7 135 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 MOB2Q70IA6 237 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 SLC26A9Q7LBE3 791 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 STRADAQ7RTN6 431 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 LIMS2Q7Z4I7 341 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 CCNJLQ8IV13 435 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 TRIM42Q8IWZ5 723 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 TOP6BLQ8N6T0 577 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 HSPH1Q92598 858 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 CENPIQ92674 756 aaPredicted RBP8.66□□□□□ -1.02
SPG11-209ENST00000558253 MTBPQ96DY7 904 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 CPB2Q96IY4 423 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 TWNKQ96RR1 684 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 TRIM6Q9C030 488 aaPredicted RBP8.66□□□□□ -1.02
SPG11-209ENST00000558253 SLC6A16Q9GZN6 736 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 VPS11Q9H270 941 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 SNX25Q9H3E2 840 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 RXFP1Q9HBX9 757 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.66□□□□□ -1.02
SPG11-209ENST00000558253 KLHL11Q9NVR0 708 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 DONSONQ9NYP3 566 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 PRKAG3Q9UGI9 489 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 PCSK1NQ9UHG2 260 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 XPO7Q9UIA9 1087 aaKnown RBP8.66□□□□□ -1.02
SPG11-209ENST00000558253 ZNF180Q9UJW8 692 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 SLC12A4Q9UP95 1085 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 RAD54BQ9Y620 910 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 ZSWIM8A7E2V4 1837 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 SF3B1O75533 1304 aaKnown RBP eCLIP8.65□□□□□ -1.02
SPG11-209ENST00000558253 E5RJQ4 531 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 POC1B-GALNT4F8VUJ3 575 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 H7C0C1 242 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 CHUKO15111 745 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 SPTLC1O15269 473 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 GCATO75600 419 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 DCTN3O75935 186 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 STK10O94804 968 aaKnown RBP8.65□□□□□ -1.02
SPG11-209ENST00000558253 NPTXRO95502 500 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 IL1BP01584 269 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 ZNF286BP0CG31 522 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 SMIM10L2AP0DMW4 78 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 SMIM10L2BP0DMW5 78 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 ALADP13716 330 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 NDUFV2P19404 249 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 TPSB2P20231 275 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 TAC1P20366 129 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 CNTFP26441 200 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 HNRNPH1P31943 449 aaKnown RBP8.65□□□□□ -1.02
SPG11-209ENST00000558253 SLC8A1P32418 973 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 GNL1P36915 607 aaPredicted RBP8.65□□□□□ -1.02
SPG11-209ENST00000558253 ATP5OP48047 213 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 RASSF2P50749 326 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 DNAJC3Q13217 504 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 TPSAB1Q15661 275 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 DPYSL2Q16555 572 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 DBN1Q16643 649 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 GALNTL6Q49A17 601 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 MSS51Q4VC12 460 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 FBXO47Q5MNV8 452 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 HHATQ5VTY9 493 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 FYB2Q5VWT5 728 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 C9orf57Q5W0N0 161 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 SCARA3Q6AZY7 606 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 TAF2Q6P1X5 1199 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 PDZD4Q76G19 769 aaPredicted RBP8.65□□□□□ -1.02
SPG11-209ENST00000558253 CYP4X1Q8N118 509 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 PLD5Q8N7P1 536 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 C2orf69Q8N8R5 385 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 ANKRD42Q8N9B4 389 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 FAM71DQ8N9W8 422 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 APPL2Q8NEU8 664 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 OR6B3Q8NGW1 331 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 UBA3Q8TBC4 463 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 LRRC8CQ8TDW0 803 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 FBF1Q8TES7 1133 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 FAM172AQ8WUF8 416 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 FAM118BQ9BPY3 351 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 SYT17Q9BSW7 474 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 R3HDMLQ9H3Y0 253 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 USP29Q9HBJ7 922 aa8.65□□□□□ -1.02
SPG11-209ENST00000558253 XAB2Q9HCS7 855 aaKnown RBP8.65□□□□□ -1.02
SPG11-209ENST00000558253 KLC4Q9NSK0 619 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms