RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ANKRD52Q8NB46 1076 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 ATRIPQ8WXE1 791 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 CD101Q93033 1021 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 P2RY13Q9BPV8 354 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 KLF16Q9BXK1 252 aaPredicted RBP9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 UBXN6Q9BZV1 441 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 DNAI2Q9GZS0 605 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 CYLDQ9NQC7 956 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 ABCA7Q8IZY2 2146 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 DCHS1Q96JQ0 3298 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 A0A1W2PQH9 124 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 CHURC1-FNTBB4DL54 471 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 GREM1O60565 184 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 RNF40O75150 1001 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 GNA14O95837 355 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 RARGP13631 454 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 TBXAS1P24557 533 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 HOXA6P31267 233 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 ANP32AP39687 249 aaKnown RBP9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 YWHAEP62258 255 aaKnown RBP9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 KCNH2Q12809 1159 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 PPP2R5DQ14738 602 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 RAB41Q5JT25 222 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 CLEC17AQ6ZS10 378 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 CCDC186Q7Z3E2 898 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 PIGZQ86VD9 579 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 PLPP6Q8IY26 295 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 ZNF276Q8N554 614 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 EHBP1Q8NDI1 1231 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 KAT5Q92993 513 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 NT5C1BQ96P26 610 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 CLSTN2Q9H4D0 955 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 POLR3BQ9NW08 1133 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 TBC1D14Q9P2M4 693 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 RWDD2AQ9UIY3 292 aa9.25□□□□□ -0.93
SNRPA1-206ENST00000558059 ANTXRLA6NF34 631 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 RNF225M0QZC1 329 aaPredicted RBP9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 TULP2O00295 520 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 O00370 1275 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 MDM4O15151 490 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 AFPP02771 609 aaKnown RBP9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 IRF1P10914 325 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 VDRP11473 427 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 ATP5C1P36542 298 aaKnown RBP9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 SLC6A11P48066 632 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 FNTBP49356 437 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 PDE4CQ08493 712 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 MESP2Q0VG99 397 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 GOLGA7BQ2TAP0 167 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 FBXO43Q4G163 708 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 PKDCCQ504Y2 493 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 SGO2Q562F6 1265 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 LY6G5CQ5SRR4 150 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 KLHDC10Q6PID8 442 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 TMEM270Q6UE05 265 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 HTR3DQ70Z44 454 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 C12orf40Q86WS4 652 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 IRF2BP1Q8IU81 584 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 ARHGEF19Q8IW93 802 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 BBS7Q8IWZ6 715 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 PPM1KQ8N3J5 372 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 TFAP2BQ92481 460 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 EXOC4Q96A65 974 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 OTUB2Q96DC9 234 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 KREMEN1Q96MU8 473 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 ZSWIM1Q9BR11 485 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 EPC1Q9H2F5 836 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 LMBRD1Q9NUN5 540 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 CLIC5Q9NZA1 410 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 NAGPAQ9UK23 515 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 NUDT5Q9UKK9 219 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 TSPAN16Q9UKR8 245 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 KIAA1257Q9ULG3 409 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 SH3BP1Q9Y3L3 701 aa9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.24□□□□□ -0.93
SNRPA1-206ENST00000558059 A0A0A0MRY4 1105 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 K7EQS6 105 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 XPO1O14980 1071 aaKnown RBP9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 ATG13O75143 517 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 FGFR1OPO95684 399 aaKnown RBP9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 CALCAP01258 141 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 PAEPP09466 180 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 CCDC192P0DO97 292 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 CD19P15391 556 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 PLA2G4AP47712 749 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 TKTL1P51854 596 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 ZNF132P52740 706 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 BCAT1P54687 386 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 GCNT1Q02742 428 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 CETN1Q12798 172 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 C10orf120Q5SQS8 335 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 HEATR6Q6AI08 1181 aaKnown RBP9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 PM20D1Q6GTS8 502 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 LCLAT1Q6UWP7 414 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 RRAGAQ7L523 313 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 BHLHA9Q7RTU4 235 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 LONP2Q86WA8 852 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 TMEM25Q86YD3 366 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 SFTPA1Q8IWL2 248 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms