RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 SATB2Q9UPW6 733 aa10.29□□□□□ -0.76
IGKV2D-28-202ENST00000558026 PLAAQ9Y263 795 aa10.29□□□□□ -0.76
IGKV2D-28-202ENST00000558026 CSMD1Q96PZ7 3565 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 CKAP5Q14008 2032 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 LRRK1Q38SD2 2015 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 NF1P21359 2839 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 A1L4Q6 167 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 GFRA2O00451 464 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 PIRO00625 290 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 VILLO15195 856 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 OLFM2O95897 454 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 ACADMP11310 421 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 IFNAR1P17181 557 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 ACP1P24666 158 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 CD27P26842 260 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 COL8A1P27658 744 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 EPHA8P29322 1005 aaPredicted RBP10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 PPP2R3AQ06190 1150 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 STARD3Q14849 445 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 SGO2Q562F6 1265 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 EARS2Q5JPH6 523 aaKnown RBP10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 CDCP2Q5VXM1 449 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 PIK3AP1Q6ZUJ8 805 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 KIAA1958Q8N8K9 716 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 SLC6A18Q96N87 628 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 ACE2Q9BYF1 805 aaPredicted RBP10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 SLC25A18Q9H1K4 315 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 PCED1AQ9H1Q7 454 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 TRPM5Q9NZQ8 1165 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 TBC1D14Q9P2M4 693 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 GTF3C4Q9UKN8 822 aa10.28□□□□□ -0.76
IGKV2D-28-202ENST00000558026 ZNF840PA6NDX5 716 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 NEDD8-MDP1E9PL57 170 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 HCRTO43612 131 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 TSPAN3O60637 253 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 OAS1P00973 400 aaKnown RBP10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CLTAP09496 248 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 MBL2P11226 248 aaPredicted RBP10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 SFTPCP11686 197 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 TXKP42681 527 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 COPAP53621 1224 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CCT2P78371 535 aaKnown RBP10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 E2F1Q01094 437 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 TSPY1Q01534 308 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 PDIA5Q14554 519 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CLCA4Q14CN2 919 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 NCAPHQ15003 741 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 ENOX2Q16206 610 aaKnown RBP10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 NFE2Q16621 373 aaPredicted RBP10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 PROX2Q3B8N5 592 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 KRTAP21-3Q3LHN1 58 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 SFMBT2Q5VUG0 894 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 JADE1Q6IE81 842 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 LEO1Q8WVC0 666 aaPredicted RBP10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 BRF1Q92994 677 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 FAM212AQ96EL1 285 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 SGF29Q96ES7 293 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 SLC46A1Q96NT5 459 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 TMEM134Q9H6X4 195 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 ABCB6Q9NP58 842 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 ARHGAP28Q9P2N2 729 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 LRWD1Q9UFC0 647 aa10.27□□□□□ -0.77
IGKV2D-28-202ENST00000558026 XPOTO43592 962 aaKnown RBP10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 OPA1O60313 960 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 TOM1L1O75674 476 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 SEMA4FO95754 770 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 IGHDP01880 384 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 RNF224P0DH78 156 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 PFKLP17858 780 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 RBMS1P29558 406 aaKnown RBP10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 MATR3P43243 847 aaKnown RBP eCLIP10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CALCRLQ16602 461 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 TBR1Q16650 682 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 KANSL1Q7Z3B3 1105 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 RASEFQ8IZ41 740 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 ZNF564Q8TBZ8 553 aaPredicted RBP10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 KIFAP3Q92845 792 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CCDC97Q96F63 343 aaPredicted RBP10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 DEPDC7Q96QD5 511 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 PKMYT1Q99640 499 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 OSBPL2Q9H1P3 480 aa10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 ATXN7L1Q9ULK2 861 aaPredicted RBP10.26□□□□□ -0.77
IGKV2D-28-202ENST00000558026 COL27A1Q8IZC6 1860 aaPredicted RBP10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CDRT15L2A8MXV6 281 aa10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 TRIM38O00635 465 aa10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 WNT7AO00755 349 aa10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 WNT9AO14904 365 aa10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 SLC16A4O15374 487 aa10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CLDN3O15551 220 aa10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 SIGLEC6O43699 453 aa10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CACNG3O60359 315 aa10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 SYNCRIPO60506 623 aaKnown RBP10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 IGHV4-34P06331 123 aa10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CISD3P0C7P0 127 aa10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 TYRP14679 529 aa10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 PRKCHP24723 683 aa10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 GRNP28799 593 aaKnown RBP10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CASRP41180 1078 aa10.25□□□□□ -0.77
IGKV2D-28-202ENST00000558026 INHBCP55103 352 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms