RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 DGAT1O75907 488 aa12.82□□□□□ -0.36
LDLR-205ENST00000557933 STBD1O95210 358 aa12.82□□□□□ -0.36
LDLR-205ENST00000557933 ZNF699Q32M78 642 aa12.82□□□□□ -0.36
LDLR-205ENST00000557933 SATL1Q86VE3 508 aa12.82□□□□□ -0.36
LDLR-205ENST00000557933 HPS6Q86YV9 775 aa12.82□□□□□ -0.36
LDLR-205ENST00000557933 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.82□□□□□ -0.36
LDLR-205ENST00000557933 GATA6Q92908 595 aa12.82□□□□□ -0.36
LDLR-205ENST00000557933 UNKQ9C0B0 810 aaKnown RBP12.82□□□□□ -0.36
LDLR-205ENST00000557933 MFHAS1Q9Y4C4 1052 aa12.82□□□□□ -0.36
LDLR-205ENST00000557933 E7ENQ6 273 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 SPECC1L-ADORA2AF8WAN1 911 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 CIB2O75838 187 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 DGKIO75912 1065 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 HMGCRP04035 888 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 GARTP22102 1010 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 OCRLQ01968 901 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 CNTN2Q02246 1040 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 DSG1Q02413 1049 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 MAP3K10Q02779 954 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 ASPHQ12797 758 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 GK3PQ14409 553 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 CA9Q16790 459 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 GRAMD1BQ3KR37 738 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 KCTD17Q8N5Z5 321 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 SLC44A1Q8WWI5 657 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 ATP6V0A1Q93050 837 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 ANKEF1Q9NU02 776 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 PNPOQ9NVS9 261 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 STRIP2Q9ULQ0 834 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 DNAJC16Q9Y2G8 782 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 AFG3L2Q9Y4W6 797 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 CNTNAP2Q9UHC6 1331 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 KIF3CO14782 793 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 PMM2O15305 246 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 TM9SF1O15321 606 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 RNF8O76064 485 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 ATP6V1B1P15313 513 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 NELFEP18615 380 aaKnown RBP12.81□□□□□ -0.36
LDLR-205ENST00000557933 TFE3P19532 575 aaPredicted RBP12.81□□□□□ -0.36
LDLR-205ENST00000557933 GRIA2P42262 883 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 RPS6KA3P51812 740 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 YWHAZP63104 245 aaKnown RBP12.81□□□□□ -0.36
LDLR-205ENST00000557933 ROR1Q01973 937 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 CNPY1Q3B7I2 92 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 ILDR2Q71H61 639 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 TNS4Q8IZW8 715 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 C12orf29Q8N999 325 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 FAM151AQ8WW52 585 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 IFT43Q96FT9 208 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 GCNAQ96QF7 691 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 ECSITQ9BQ95 431 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 PLAC1Q9HBJ0 212 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 ADAMTS6Q9UKP5 1117 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 USP18Q9UMW8 372 aa12.81□□□□□ -0.36
LDLR-205ENST00000557933 SYNJ2BP-COX16A0A087WUM0 186 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 GOLGA8QA0A0J9YX86 632 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 GOLGA8OA6NCC3 632 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 GOLGA8NF8WBI6 632 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 M0QYV0 167 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 TBC1D12O60347 775 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 LYPLA2O95372 231 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 CALB1P05937 261 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 KCNA2P16389 499 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 PPP2R5DQ14738 602 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 TRIP10Q15642 601 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 CCDC142Q17RM4 750 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 TRNP1Q6NT89 227 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 PPP1R13LQ8WUF5 828 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 NLRP4Q96MN2 994 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 RNPEPQ9H4A4 650 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 SLC38A10Q9HBR0 1119 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 ETNK2Q9NVF9 386 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 COX16Q9P0S2 106 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 DRG1Q9Y295 367 aaKnown RBP12.8□□□□□ -0.36
LDLR-205ENST00000557933 TCRBV5S1A1TA0A578 114 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 MAGEA13PA6NCF6 341 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 LMNAP02545 664 aaKnown RBP12.8□□□□□ -0.36
LDLR-205ENST00000557933 TRAF1Q13077 416 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 LBRQ14739 615 aaKnown RBP12.8□□□□□ -0.36
LDLR-205ENST00000557933 RABGAP1LQ5R372 815 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 DPY19L2Q6NUT2 758 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 PTAR1Q7Z6K3 402 aaPredicted RBP12.8□□□□□ -0.36
LDLR-205ENST00000557933 MCF2L2Q86YR7 1114 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 B4GALNT2Q8NHY0 566 aa12.8□□□□□ -0.36
LDLR-205ENST00000557933 NTPCRQ9BSD7 190 aaKnown RBP12.8□□□□□ -0.36
LDLR-205ENST00000557933 DDX18Q9NVP1 670 aaKnown RBP12.8□□□□□ -0.36
LDLR-205ENST00000557933 HMX2A2RU54 273 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 E9PBE3 544 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 KLHL41O60662 606 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 ASNSP08243 561 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 HMGCS2P54868 508 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 SESN2P58004 480 aaPredicted RBP12.79□□□□□ -0.36
LDLR-205ENST00000557933 CAPSQ13938 189 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 PIGHQ14442 188 aaPredicted RBP12.79□□□□□ -0.36
LDLR-205ENST00000557933 DLK2Q6UY11 383 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 PHTF2Q8N3S3 785 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 MCPH1Q8NEM0 835 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 PRPF31Q8WWY3 499 aaKnown RBP12.79□□□□□ -0.36
LDLR-205ENST00000557933 SLC7A3Q8WY07 619 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 ZNF778Q96MU6 729 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms