RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 TTC16Q8NEE8 873 aa26.79■■□□□ 1.88
SMAD6-202ENST00000557916 SYN2Q92777 582 aaPredicted RBP26.79■■□□□ 1.88
SMAD6-202ENST00000557916 GOLGA1Q92805 767 aa26.79■■□□□ 1.88
SMAD6-202ENST00000557916 HAUS4Q9H6D7 363 aa26.79■■□□□ 1.88
SMAD6-202ENST00000557916 SMPD4Q9NXE4 827 aa26.79■■□□□ 1.88
SMAD6-202ENST00000557916 TNFRSF10AO00220 468 aa26.78■■□□□ 1.88
SMAD6-202ENST00000557916 LTFP02788 710 aa26.78■■□□□ 1.88
SMAD6-202ENST00000557916 ERBB2P04626 1255 aa26.78■■□□□ 1.88
SMAD6-202ENST00000557916 KLHL30Q0D2K2 578 aa26.78■■□□□ 1.88
SMAD6-202ENST00000557916 KLHDC10Q6PID8 442 aa26.78■■□□□ 1.88
SMAD6-202ENST00000557916 RSRC2Q7L4I2 434 aaKnown RBP26.78■■□□□ 1.88
SMAD6-202ENST00000557916 ERICH1Q86X53 443 aa26.78■■□□□ 1.88
SMAD6-202ENST00000557916 YAF2Q8IY57 180 aa26.78■■□□□ 1.88
SMAD6-202ENST00000557916 MSANTD4Q8NCY6 345 aa26.78■■□□□ 1.88
SMAD6-202ENST00000557916 BPIFB1Q8TDL5 484 aa26.78■■□□□ 1.88
SMAD6-202ENST00000557916 SH3RF2Q8TEC5 729 aa26.78■■□□□ 1.88
SMAD6-202ENST00000557916 KHSRPQ92945 711 aaKnown RBP eCLIP26.78■■□□□ 1.88
SMAD6-202ENST00000557916 TRMT61BQ9BVS5 477 aaKnown RBP26.78■■□□□ 1.88
SMAD6-202ENST00000557916 SMOC2Q9H3U7 446 aa26.78■■□□□ 1.88
SMAD6-202ENST00000557916 ABCC13Q9NSE7 274 aa26.78■■□□□ 1.88
SMAD6-202ENST00000557916 DCXO43602 365 aa26.77■■□□□ 1.88
SMAD6-202ENST00000557916 NARSO43776 548 aaKnown RBP26.77■■□□□ 1.88
SMAD6-202ENST00000557916 TPM1P09493 284 aa26.77■■□□□ 1.88
SMAD6-202ENST00000557916 SKILP12757 684 aa26.77■■□□□ 1.88
SMAD6-202ENST00000557916 ZXDBP98169 803 aa26.77■■□□□ 1.88
SMAD6-202ENST00000557916 TMC6Q7Z403 805 aa26.77■■□□□ 1.88
SMAD6-202ENST00000557916 UBALD2Q8IYN6 164 aa26.77■■□□□ 1.88
SMAD6-202ENST00000557916 EDEM1Q92611 657 aa26.77■■□□□ 1.88
SMAD6-202ENST00000557916 MRFAP1L1Q96HT8 127 aa26.77■■□□□ 1.88
SMAD6-202ENST00000557916 SYT11Q9BT88 431 aa26.77■■□□□ 1.88
SMAD6-202ENST00000557916 DNMT3LQ9UJW3 386 aa26.77■■□□□ 1.88
SMAD6-202ENST00000557916 DUSP12Q9UNI6 340 aa26.77■■□□□ 1.88
SMAD6-202ENST00000557916 LEFTY2O00292 366 aa26.76■■□□□ 1.87
SMAD6-202ENST00000557916 SRFP11831 508 aa26.76■■□□□ 1.87
SMAD6-202ENST00000557916 UNGP13051 313 aaPredicted RBP26.76■■□□□ 1.87
SMAD6-202ENST00000557916 TNFAIP3P21580 790 aa26.76■■□□□ 1.87
SMAD6-202ENST00000557916 GABRB2P47870 512 aa26.76■■□□□ 1.87
SMAD6-202ENST00000557916 GPC5P78333 572 aa26.76■■□□□ 1.87
SMAD6-202ENST00000557916 FCHO2Q0JRZ9 810 aa26.76■■□□□ 1.87
SMAD6-202ENST00000557916 CLEC16AQ2KHT3 1053 aa26.76■■□□□ 1.87
SMAD6-202ENST00000557916 OR6B2Q6IFH4 312 aa26.76■■□□□ 1.87
SMAD6-202ENST00000557916 FAM183BPQ6ZVS7 135 aa26.76■■□□□ 1.87
SMAD6-202ENST00000557916 RIN3Q8TB24 985 aa26.76■■□□□ 1.87
SMAD6-202ENST00000557916 RNF139Q8WU17 664 aa26.76■■□□□ 1.87
SMAD6-202ENST00000557916 FAM149B1Q96BN6 582 aa26.76■■□□□ 1.87
SMAD6-202ENST00000557916 C18orf8Q96DM3 657 aa26.76■■□□□ 1.87
SMAD6-202ENST00000557916 THG1LQ9NWX6 298 aaKnown RBP26.76■■□□□ 1.87
SMAD6-202ENST00000557916 MDM4O15151 490 aa26.75■■□□□ 1.87
SMAD6-202ENST00000557916 TCF3P15923 654 aa26.75■■□□□ 1.87
SMAD6-202ENST00000557916 GDI1P31150 447 aa26.75■■□□□ 1.87
SMAD6-202ENST00000557916 EFEMP1Q12805 493 aa26.75■■□□□ 1.87
SMAD6-202ENST00000557916 USP4Q13107 963 aa26.75■■□□□ 1.87
SMAD6-202ENST00000557916 ZNF77Q15935 545 aa26.75■■□□□ 1.87
SMAD6-202ENST00000557916 ZNF571Q7Z3V5 609 aaPredicted RBP26.75■■□□□ 1.87
SMAD6-202ENST00000557916 DDX42Q86XP3 938 aaKnown RBP eCLIP26.75■■□□□ 1.87
SMAD6-202ENST00000557916 ZFRQ96KR1 1074 aaKnown RBP26.75■■□□□ 1.87
SMAD6-202ENST00000557916 BRD9Q9H8M2 597 aa26.75■■□□□ 1.87
SMAD6-202ENST00000557916 GKN1Q9NS71 199 aa26.75■■□□□ 1.87
SMAD6-202ENST00000557916 OLA1Q9NTK5 396 aaKnown RBP26.75■■□□□ 1.87
SMAD6-202ENST00000557916 BZW2Q9Y6E2 419 aaKnown RBP26.75■■□□□ 1.87
SMAD6-202ENST00000557916 ALADP13716 330 aa26.74■■□□□ 1.87
SMAD6-202ENST00000557916 NSFP46459 744 aaKnown RBP26.74■■□□□ 1.87
SMAD6-202ENST00000557916 ZXDAP98168 799 aa26.74■■□□□ 1.87
SMAD6-202ENST00000557916 HGSNATQ68CP4 663 aa26.74■■□□□ 1.87
SMAD6-202ENST00000557916 MIB1Q86YT6 1006 aa26.74■■□□□ 1.87
SMAD6-202ENST00000557916 ZDHHC17Q8IUH5 632 aa26.74■■□□□ 1.87
SMAD6-202ENST00000557916 SLC30A5Q8TAD4 765 aa26.74■■□□□ 1.87
SMAD6-202ENST00000557916 PIWIL1Q96J94 861 aaKnown RBP26.74■■□□□ 1.87
SMAD6-202ENST00000557916 CFAP97Q9P2B7 532 aa26.74■■□□□ 1.87
SMAD6-202ENST00000557916 RASAL2Q9UJF2 1139 aa26.74■■□□□ 1.87
SMAD6-202ENST00000557916 ZNF263O14978 683 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 YWHAZP63104 245 aaKnown RBP26.73■■□□□ 1.87
SMAD6-202ENST00000557916 SLC6A3Q01959 620 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 CENPCQ03188 943 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 MTF1Q14872 753 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 TAF5Q15542 800 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 ARHGAP29Q52LW3 1261 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 C2CD6Q53TS8 623 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 TDRD12Q587J7 1177 aaKnown RBP26.73■■□□□ 1.87
SMAD6-202ENST00000557916 CC2D1AQ6P1N0 951 aaPredicted RBP26.73■■□□□ 1.87
SMAD6-202ENST00000557916 OLFML1Q6UWY5 402 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 MMS22LQ6ZRQ5 1243 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 TOGARAM2Q6ZUX3 1019 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 OR8K1Q8NGG5 319 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 OLIG1Q8TAK6 271 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 KLF16Q9BXK1 252 aaPredicted RBP26.73■■□□□ 1.87
SMAD6-202ENST00000557916 SLC2A4RGQ9NR83 387 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 MARCH2Q9P0N8 246 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 CHADO15335 359 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 SERPING1P05155 500 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 FYNP06241 537 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 MMP8P22894 467 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 TBX2Q13207 712 aaPredicted RBP26.73■■□□□ 1.87
SMAD6-202ENST00000557916 EFHC1Q5JVL4 640 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 XYLT1Q86Y38 959 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 IRF7Q92985 503 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 ZFYVE19Q96K21 471 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 TRIM62Q9BVG3 475 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 POPDC2Q9HBU9 364 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 ASNSD1Q9NWL6 643 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms