RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	SFI1	A8K8P3	1242 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	OGT	O15294	1046 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	SYNCRIP	O60506	623 aa	Known RBP	10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	DXO	O77932	396 aa	Known RBP	10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	MT-CO3	P00414	261 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	MPO	P05164	745 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	ACAT1	P24752	427 aa	Known RBP	10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	MAGEA11	P43364	429 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	USP46	P62068	366 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	E2F1	Q01094	437 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	INSM1	Q01101	510 aa	Predicted RBP	10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	ECM1	Q16610	540 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	FAM124A	Q86V42	546 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	PDCL2	Q8N4E4	241 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	ELF4	Q99607	663 aa	Predicted RBP	10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	PKMYT1	Q99640	499 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	DPP3	Q9NY33	737 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	KIAA1024	Q9UPX6	916 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	SSUH2	Q9Y2M2	353 aa		10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	10.02	□□□□□ -0.81
PABPN1-208	ENST00000557702	NUMA1	Q14980	2115 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	C2CD3	Q4AC94	2353 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	USP9Y	O00507	2555 aa	Predicted RBP	10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	NEDD8-MDP1	E9PL57	170 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	WNT7A	O00755	349 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	NPC1	O15118	1278 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	TRAK2	O60296	914 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	CACNG3	O60359	315 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	CDKL5	O76039	1030 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	MAPT	P10636	758 aa	Known RBP	10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	CKMT2	P17540	419 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	ANXA13	P27216	316 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	PSMA5	P28066	241 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	CCT6A	P40227	531 aa	Known RBP	10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	LIG4	P49917	911 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	GABRE	P78334	506 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	MAPK7	Q13164	816 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	STK3	Q13188	491 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	PRAMEF14	Q5SWL7	426 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	VSTM1	Q6UX27	236 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	CCDC81	Q6ZN84	652 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	C4orf50	Q6ZRC1	276 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	BBS7	Q8IWZ6	715 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	TMEM86A	Q8N2M4	240 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	SAP25	Q8TEE9	199 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	TNFRSF25	Q93038	417 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	SKA1	Q96BD8	255 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	BIRC7	Q96CA5	298 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	ZNF274	Q96GC6	653 aa	Predicted RBP	10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	PSMG3-AS1	Q96PY0	264 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	MMS19	Q96T76	1030 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	DUSP9	Q99956	384 aa	Known RBP	10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	TTLL2	Q9BWV7	592 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	ACE2	Q9BYF1	805 aa	Predicted RBP	10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	ASB7	Q9H672	318 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	C6orf106	Q9H6K1	298 aa	Predicted RBP	10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	THSD1	Q9NS62	852 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	WDR35	Q9P2L0	1181 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	MAN2B2	Q9Y2E5	1009 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	C2CD2	Q9Y426	696 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	PCDHB1	Q9Y5F3	818 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	FLNC	Q14315	2725 aa		10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	SPTBN1	Q01082	2364 aa	Known RBP	10.01	□□□□□ -0.81
PABPN1-208	ENST00000557702	NBAS	A2RRP1	2371 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	VILL	O15195	856 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	YKT6	O15498	198 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	FAM189A1	O60320	539 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	HUS1	O60921	280 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	SFTPC	P11686	197 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	PLS3	P13797	630 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	TYR	P14679	529 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	CD27	P26842	260 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	PCSK1	P29120	753 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	CDC25A	P30304	524 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	MCM7	P33993	719 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	PNPLA4	P41247	253 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	LSS	P48449	732 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	DGKG	P49619	791 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	RIPPLY3	P57055	190 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	TLE1	Q04724	770 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	TAF10	Q12962	218 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	MAPK8IP2	Q13387	824 aa	Predicted RBP	10	□□□□□ -0.81
PABPN1-208	ENST00000557702	SGO2	Q562F6	1265 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	TDRD10	Q5VZ19	366 aa	Known RBP	10	□□□□□ -0.81
PABPN1-208	ENST00000557702	RINT1	Q6NUQ1	792 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	KCNB2	Q92953	911 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	CCDC97	Q96F63	343 aa	Predicted RBP	10	□□□□□ -0.81
PABPN1-208	ENST00000557702	VCPIP1	Q96JH7	1222 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	ZNF560	Q96MR9	790 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	SLITRK1	Q96PX8	696 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	ARHGAP9	Q9BRR9	750 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	BBS2	Q9BXC9	721 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	DDX19A	Q9NUU7	478 aa	Known RBP	10	□□□□□ -0.81
PABPN1-208	ENST00000557702	HSPBP1	Q9NZL4	362 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	LRWD1	Q9UFC0	647 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	CPSF3	Q9UKF6	684 aa	Known RBP	10	□□□□□ -0.81
PABPN1-208	ENST00000557702	DNM3	Q9UQ16	869 aa		10	□□□□□ -0.81
PABPN1-208	ENST00000557702	RELN	P78509	3460 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms