RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 ACADSBP45954 432 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 IFNAR2P48551 515 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 ZXDBP98169 803 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 ARID5AQ03989 594 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 GOLGA8FQ08AF8 430 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 GOLGA8DPQ0D2H9 430 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 NR1I3Q14994 352 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 MLF2Q15773 248 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 IER5LQ5T953 404 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 BTBD8Q5XKL5 378 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 BHLHA9Q7RTU4 235 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 SCML4Q8N228 414 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 CLEC4CQ8WTT0 213 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 STK32AQ8WU08 396 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 GOLGA1Q92805 767 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 PBXIP1Q96AQ6 731 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 ZFRQ96KR1 1074 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 CDK5RAP1Q96SZ6 601 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 LHX5Q9H2C1 402 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 HEBP1Q9NRV9 189 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 CFAP97Q9P2B7 532 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 RASAL2Q9UJF2 1139 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 DNMT3LQ9UJW3 386 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 WNT6Q9Y6F9 365 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 MYO18AQ92614 2054 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 FAM170AA1A519 330 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 KRBA1A5PL33 1030 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 PRR33A8MZF0 331 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 SART1O43290 800 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 GPR37L1O60883 481 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 TPM3P06753 285 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 MMEP08473 750 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 RPL34P49207 117 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 TNK2Q07912 1038 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 EFEMP1Q12805 493 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 SLC44A4Q53GD3 710 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 BSPRYQ5W0U4 402 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 TRIM68Q6AZZ1 485 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 KLHDC10Q6PID8 442 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 TPRG1Q6ZUI0 275 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 HFE2Q6ZVN8 426 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 MIB1Q86YT6 1006 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 SCUBE3Q8IX30 993 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 TMEM35BQ8NCS4 154 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 FLCNQ8NFG4 579 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 TTC8Q8TAM2 541 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 IPO4Q8TEX9 1081 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 SLC20A1Q8WUM9 679 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 IRGQQ8WZA9 623 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 DDX1Q92499 740 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 EDEM1Q92611 657 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 FAM149B1Q96BN6 582 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 PPP1R13BQ96KQ4 1090 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 CPXM1Q96SM3 734 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 SLC4A5Q9BY07 1137 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 EBF3Q9H4W6 596 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 SYNCQ9H7C4 482 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 TRPV5Q9NQA5 729 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 GKN1Q9NS71 199 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 DUS2Q9NX74 493 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 GTSE1Q9NYZ3 720 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 TJP2Q9UDY2 1190 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 NOCTQ9UK39 431 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 SH3BP1Q9Y3L3 701 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 PIAS3Q9Y6X2 628 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 LRRC53A6NM62 1247 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 STK25O00506 426 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 PAPSS1O43252 624 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 LSM8O95777 96 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 LTFP02788 710 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 FERP16591 822 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 KPNA1P52294 538 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 CDR2Q01850 454 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 PRKCQQ04759 706 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 PDGFRLQ15198 375 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 ITPRIPL2Q3MIP1 535 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 PTPN20Q4JDL3 420 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 ZNF677Q86XU0 584 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 FMNL3Q8IVF7 1028 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 SUGP1Q8IWZ8 645 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 ZNF276Q8N554 614 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 WDTC1Q8N5D0 677 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 RNF139Q8WU17 664 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 OSCP1Q8WVF1 389 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 BAP1Q92560 729 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 ATP2A3Q93084 1043 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 SHDQ96IW2 340 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 FAM83CQ9BQN1 747 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 XPO4Q9C0E2 1151 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 TBC1D17Q9HA65 648 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 HPS4Q9NQG7 708 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 ABCC13Q9NSE7 274 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 OLA1Q9NTK5 396 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 MARCH2Q9P0N8 246 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 STRIP2Q9ULQ0 834 aa11.09□□□□□ -0.63
HNRNPC-232ENST00000557442 CACNA1IQ9P0X4 2223 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 DOCK4Q8N1I0 1966 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 E2F8A0AVK6 867 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 SLC9A3R1O14745 358 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 CBFA2T2O43439 604 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms