RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 CCDC196A0A1B0GTZ2 297 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 KLHL33A6NCF5 533 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 GOLGA6L6A8MZA4 724 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 GOLGA6L22H0YM25 854 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 K7ESF4 209 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 ZNF197O14709 1029 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 SLC27A2O14975 620 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 ZNF263O14978 683 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 ADAM12O43184 909 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 ZBTB43O43298 467 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 EDIL3O43854 480 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 TSPAN1O60635 241 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 ERLIN2O94905 339 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 IGHDP01880 384 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 HPXP02790 462 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 GSNP06396 782 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 UQCRHP07919 91 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 RHOP08100 348 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 SETSIPP0DME0 302 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 PSMC3P17980 439 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 GDI1P31150 447 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 OR1D2P34982 312 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 GIPRP48546 466 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 GALK1P51570 392 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 NAP1L1P55209 391 aaKnown RBP5.33□□□□□ -1.56
ATXN3-247ENST00000557311 PTENP60484 403 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 POU5F1BQ06416 359 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 GRIK3Q13003 919 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 SRSF5Q13243 272 aaKnown RBP5.33□□□□□ -1.56
ATXN3-247ENST00000557311 SF3A2Q15428 464 aaKnown RBP5.33□□□□□ -1.56
ATXN3-247ENST00000557311 Q4G0T1 1027 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 FAM78AQ5JUQ0 283 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 DGKKQ5KSL6 1271 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 TTC22Q5TAA0 569 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 APOA5Q6Q788 366 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 B3GNT9Q6UX72 402 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 SPOCD1Q6ZMY3 1216 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 OTUD6AQ7L8S5 288 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 CACNA2D4Q7Z3S7 1137 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 FERMT3Q86UX7 667 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 WDR5BQ86VZ2 330 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 LILRA2Q8N149 483 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 SYNPOQ8N3V7 929 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 RNF149Q8NC42 400 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 ING5Q8WYH8 240 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 RABGGTAQ92696 567 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 TMEM143Q96AN5 459 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 MSANTD3Q96H12 275 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 CEP170P1Q96L14 293 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 APOL6Q9BWW8 343 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 LRRC2Q9BYS8 371 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 RNF32Q9H0A6 362 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 DHX33Q9H6R0 707 aaKnown RBP5.33□□□□□ -1.56
ATXN3-247ENST00000557311 C8orf33Q9H7E9 229 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-247ENST00000557311 MED4Q9NPJ6 270 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 RXFP3Q9NSD7 469 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 STRIP2Q9ULQ0 834 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 SF3B6Q9Y3B4 125 aaKnown RBP5.33□□□□□ -1.56
ATXN3-247ENST00000557311 HES2Q9Y543 173 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 PCDHGA5Q9Y5G8 931 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 PIAS3Q9Y6X2 628 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 CFAP47Q6ZTR5 3102 aa5.33□□□□□ -1.56
ATXN3-247ENST00000557311 MAP1BP46821 2468 aaKnown RBP5.33□□□□□ -1.56
ATXN3-247ENST00000557311 BAHCC1Q9P281 2608 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 CYP3A7-CYP3A51PA0A087WV96 503 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 CCDC163A0A0D9SF12 145 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 A0A1B0GUA9 196 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 A0A1W2PQH9 124 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 A0A1W2PQJ5 194 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 ARHGEF37A1IGU5 675 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 ZNF503-AS2A6NEH8 195 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 SRRM3A6NNA2 597 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 GOLGA8AA7E2F4 631 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 GOLGA8BA8MQT2 603 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 INO80B-WBP1J3KQ70 363 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 PES1O00541 588 aaKnown RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 ADAMTS3O15072 1205 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 CCP110O43303 1012 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 PRPF3O43395 683 aaKnown RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 EPN2O95208 641 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 LRG1P02750 347 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 GSPT1P15170 499 aaKnown RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 CD247P20963 164 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 ENDOUP21128 410 aaKnown RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 FCARP24071 287 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 CYP3A7P24462 503 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 AKAP5P24588 427 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 CCNE1P24864 410 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 MSNP26038 577 aaKnown RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 DNAJA1P31689 397 aaKnown RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 ELF1P32519 619 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 NOP2P46087 812 aaKnown RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 RAP1GAPP47736 663 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 QARSP47897 775 aaKnown RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 NOVA1P51513 510 aaKnown RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 RCAN1P53805 252 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 NPEPPSP55786 919 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 HMGN5P82970 282 aaKnown RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 EXOSC10Q01780 885 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms