RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 BBC3Q96PG8 261 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-246ENST00000557030 NEK1Q96PY6 1258 aa5.27□□□□□ -1.57
ATXN3-246ENST00000557030 MAP3K14Q99558 947 aa5.27□□□□□ -1.57
ATXN3-246ENST00000557030 NUP88Q99567 741 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-246ENST00000557030 BPIFA3Q9BQP9 254 aa5.27□□□□□ -1.57
ATXN3-246ENST00000557030 OSBPL5Q9H0X9 879 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-246ENST00000557030 BICC1Q9H694 974 aaKnown RBP5.27□□□□□ -1.57
ATXN3-246ENST00000557030 ARGLU1Q9NWB6 273 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-246ENST00000557030 CTTNBP2NLQ9P2B4 639 aa5.27□□□□□ -1.57
ATXN3-246ENST00000557030 FEZ2Q9UHY8 353 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-246ENST00000557030 POLHQ9Y253 713 aa5.27□□□□□ -1.57
ATXN3-246ENST00000557030 USP16Q9Y5T5 823 aa5.27□□□□□ -1.57
ATXN3-246ENST00000557030 PARP4Q9UKK3 1724 aaKnown RBP5.26□□□□□ -1.57
ATXN3-246ENST00000557030 A0A1W2PS29 197 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 CCDC69A6NI79 296 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 NT5C1B-RDH14C9J2C7 533 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 ATP8B1O43520 1251 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 TAF5LO75529 589 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 MYL6BP14649 208 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 RFX5P48382 616 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-246ENST00000557030 PIP4K2AP48426 406 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-246ENST00000557030 GCKRQ14397 625 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 TEX35Q5T0J7 233 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 KIAA0895LQ68EN5 471 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 Q6ZNX1 250 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 CCAR1Q8IX12 1150 aaKnown RBP5.26□□□□□ -1.57
ATXN3-246ENST00000557030 CAMKK1Q8N5S9 505 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 AOPEPQ8N6M6 819 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 TTC8Q8TAM2 541 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 MRPS27Q92552 414 aaKnown RBP5.26□□□□□ -1.57
ATXN3-246ENST00000557030 CAVIN3Q969G5 261 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 PGBD1Q96JS3 809 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 FAM227BQ96M60 508 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 CRAMP1Q96RY5 1269 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 MYD88Q99836 296 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 BRD9Q9H8M2 597 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 KMT5AQ9NQR1 393 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 FOXJ2Q9P0K8 574 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 TESQ9UGI8 421 aaKnown RBP5.26□□□□□ -1.57
ATXN3-246ENST00000557030 NRBP1Q9UHY1 535 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 PNMA8BQ9ULN7 279 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-246ENST00000557030 NR2E3Q9Y5X4 410 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 COL15A1P39059 1388 aa5.26□□□□□ -1.57
ATXN3-246ENST00000557030 WDR17Q8IZU2 1322 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 ATRNO75882 1429 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 KCPQ6ZWJ8 1503 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 A0A0D9SFI3 127 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 GOLGA6L9A6NEM1 432 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 ZNF785A8K8V0 405 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 H3BUI4 141 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 KIAA0355O15063 1070 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 SLC16A6O15403 523 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 ALDH2P05091 517 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 MYBP10242 640 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 SFPQP23246 707 aaKnown RBP eCLIP5.25□□□□□ -1.57
ATXN3-246ENST00000557030 PRDX5P30044 214 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 CYP2C19P33261 490 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 HK3P52790 923 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 CCZ1BP86790 482 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 CCZ1P86791 482 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-246ENST00000557030 NEXNQ0ZGT2 675 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 ZNF169Q14929 603 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-246ENST00000557030 MLC1Q15049 377 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 GEN1Q17RS7 908 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 RABL6Q3YEC7 729 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-246ENST00000557030 ATAT1Q5SQI0 421 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 MAGEB6Q8N7X4 407 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 FSIP1Q8NA03 581 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 PDPRQ8NCN5 879 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 SIMC1Q8NDZ2 872 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 KCNG4Q8TDN1 519 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 LRIG1Q96JA1 1093 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 TIGD1Q96MW7 591 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 ARMT1Q9H993 441 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 NMRK2Q9NPI5 230 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 GNL3LQ9NVN8 582 aaKnown RBP5.25□□□□□ -1.57
ATXN3-246ENST00000557030 ZNF215Q9UL58 517 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-246ENST00000557030 PCDHA1Q9Y5I3 950 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 PAPPAQ13219 1627 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 ABCA3Q99758 1704 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 SHANK3Q9BYB0 1731 aa5.25□□□□□ -1.57
ATXN3-246ENST00000557030 PHLPP2Q6ZVD8 1323 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 SH3TC1Q8TE82 1336 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 LAMB4A4D0S4 1761 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 UBR2Q8IWV8 1755 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 PRSS29PA6NIE9 313 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 ERVV-2B6SEH9 535 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 IKBKBO14920 756 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 DHX16O60231 1041 aaKnown RBP5.24□□□□□ -1.57
ATXN3-246ENST00000557030 ARIH2O95376 493 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 YEATS4O95619 227 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 NUDT3O95989 172 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 AHSGP02765 367 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 GJB1P08034 283 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 TYRP14679 529 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 H2AFXP16104 143 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-246ENST00000557030 HSPA6P17066 643 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 ME1P48163 572 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 PIK3CGP48736 1102 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 SLC20A2Q08357 652 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms