RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 GOLGA8FQ08AF8 430 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 GOLGA8DPQ0D2H9 430 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 UBXN2BQ14CS0 331 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 SYCP1Q15431 976 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 C10orf120Q5SQS8 335 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 BTBD8Q5XKL5 378 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 TRIM68Q6AZZ1 485 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 DENND1BQ6P3S1 775 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 SLC47A2Q86VL8 602 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 CPA6Q8N4T0 437 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 IRGQQ8WZA9 623 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 ZFRQ96KR1 1074 aaKnown RBP11.22□□□□□ -0.61
LINC00239-201ENST00000556973 PCMTD1Q96MG8 357 aaPredicted RBP11.22□□□□□ -0.61
LINC00239-201ENST00000556973 ERGIC2Q96RQ1 377 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 KLF16Q9BXK1 252 aaPredicted RBP11.22□□□□□ -0.61
LINC00239-201ENST00000556973 LHX5Q9H2C1 402 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 LINC00597Q9H2U6 94 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 HPS4Q9NQG7 708 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 ABCC13Q9NSE7 274 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 FAM207AQ9NSI2 230 aaPredicted RBP11.22□□□□□ -0.61
LINC00239-201ENST00000556973 CFAP97Q9P2B7 532 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 TBC1D14Q9P2M4 693 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 DNMT3LQ9UJW3 386 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 SH3BP1Q9Y3L3 701 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 MTF2Q9Y483 593 aaPredicted RBP11.22□□□□□ -0.61
LINC00239-201ENST00000556973 ARIH1Q9Y4X5 557 aaPredicted RBP11.22□□□□□ -0.61
LINC00239-201ENST00000556973 WNT6Q9Y6F9 365 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 COL4A3Q01955 1670 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 SHISA7A6NL88 538 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 SPECC1L-ADORA2AF8WAN1 911 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 FBXO21O94952 628 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 NFATC1O95644 943 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 ARSAP15289 507 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 CTHP32929 405 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 KLK7P49862 253 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 DAOAP59103 153 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 POLR2FP61218 127 aaKnown RBP11.21□□□□□ -0.61
LINC00239-201ENST00000556973 COG7P83436 770 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 NFKBIBQ15653 356 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 EML3Q32P44 896 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 BSPRYQ5W0U4 402 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 HTR3DQ70Z44 454 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 RSRC2Q7L4I2 434 aaKnown RBP11.21□□□□□ -0.61
LINC00239-201ENST00000556973 BHLHA9Q7RTU4 235 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 TMEM110Q86TL2 294 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 SCUBE3Q8IX30 993 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 NEK11Q8NG66 645 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 TTC8Q8TAM2 541 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 NDRG1Q92597 394 aaKnown RBP11.21□□□□□ -0.61
LINC00239-201ENST00000556973 GOLGA1Q92805 767 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 EXOC4Q96A65 974 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 CLDN23Q96B33 292 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 OTUB2Q96DC9 234 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 SLC4A5Q9BY07 1137 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 FOXQ1Q9C009 403 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 GANQ9H2C0 597 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 ECT2Q9H8V3 914 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 CBX8Q9HC52 389 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 LTB4R2Q9NPC1 389 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
LINC00239-201ENST00000556973 ST7Q9NRC1 585 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 OLA1Q9NTK5 396 aaKnown RBP11.21□□□□□ -0.61
LINC00239-201ENST00000556973 NUDT5Q9UKK9 219 aa11.21□□□□□ -0.61
LINC00239-201ENST00000556973 OTOL1A6NHN0 477 aaPredicted RBP11.2□□□□□ -0.62
LINC00239-201ENST00000556973 YJEFN3A6XGL0 299 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 E7ENQ6 273 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 F8VZ95 297 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 GOLGA6L19H0YKK7 550 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 PIK3R2O00459 728 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 SART1O43290 800 aaKnown RBP11.2□□□□□ -0.62
LINC00239-201ENST00000556973 SERPINC1P01008 464 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 DCNP07585 359 aaKnown RBP11.2□□□□□ -0.62
LINC00239-201ENST00000556973 PNMA6AP0CW24 399 aaPredicted RBP11.2□□□□□ -0.62
LINC00239-201ENST00000556973 CYP11B1P15538 503 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 STAT1P42224 750 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 MAGEA9P43362 315 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 RPS9P46781 194 aaKnown RBP11.2□□□□□ -0.62
LINC00239-201ENST00000556973 SOX9P48436 509 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 JAM2P57087 298 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 SNX16P57768 344 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 FZD5Q13467 585 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 LUZP1Q86V48 1076 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 ZNF687Q8N1G0 1237 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 WDTC1Q8N5D0 677 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 RNF139Q8WU17 664 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 SPAG5Q96R06 1193 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 MIS12Q9H081 205 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 PDCL3Q9H2J4 239 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 LMAN1LQ9HAT1 526 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 NLRC4Q9NPP4 1024 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 DLGAP2Q9P1A6 1054 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 CYTH4Q9UIA0 394 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 LSM7Q9UK45 103 aaKnown RBP11.2□□□□□ -0.62
LINC00239-201ENST00000556973 STRIP2Q9ULQ0 834 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 NDRG2Q9UN36 371 aaKnown RBP11.2□□□□□ -0.62
LINC00239-201ENST00000556973 ZNF510Q9Y2H8 683 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 CEP83Q9Y592 693 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 CUL9Q8IWT3 2517 aa11.2□□□□□ -0.62
LINC00239-201ENST00000556973 TRDMT1O14717 391 aaKnown RBP11.19□□□□□ -0.62
LINC00239-201ENST00000556973 MDM4O15151 490 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms