RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 CNGB3Q9NQW8 809 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 THAP12O43422 761 aa24.01■■□□□ 1.43
TDP1-216ENST00000556867 NFATC1O95644 943 aa24.01■■□□□ 1.43
TDP1-216ENST00000556867 PTPN5P54829 565 aa24.01■■□□□ 1.43
TDP1-216ENST00000556867 YWHAGP61981 247 aaKnown RBP eCLIP24.01■■□□□ 1.43
TDP1-216ENST00000556867 TCF15Q12870 199 aa24.01■■□□□ 1.43
TDP1-216ENST00000556867 C10orf120Q5SQS8 335 aa24.01■■□□□ 1.43
TDP1-216ENST00000556867 FKBP15Q5T1M5 1219 aa24.01■■□□□ 1.43
TDP1-216ENST00000556867 CHFRQ96EP1 664 aa24.01■■□□□ 1.43
TDP1-216ENST00000556867 ACP6Q9NPH0 428 aa24.01■■□□□ 1.43
TDP1-216ENST00000556867 DNMT3LQ9UJW3 386 aa24.01■■□□□ 1.43
TDP1-216ENST00000556867 FHOD1Q9Y613 1164 aa24.01■■□□□ 1.43
TDP1-216ENST00000556867 LRRC10BA6NIK2 292 aa24■■□□□ 1.43
TDP1-216ENST00000556867 LGALS16A8MUM7 142 aa24■■□□□ 1.43
TDP1-216ENST00000556867 FOXN3O00409 490 aaPredicted RBP24■■□□□ 1.43
TDP1-216ENST00000556867 GABBR2O75899 941 aa24■■□□□ 1.43
TDP1-216ENST00000556867 UCHL3P15374 230 aa24■■□□□ 1.43
TDP1-216ENST00000556867 GPD2P43304 727 aa24■■□□□ 1.43
TDP1-216ENST00000556867 RGS7P49802 495 aa24■■□□□ 1.43
TDP1-216ENST00000556867 AMPD2Q01433 879 aa24■■□□□ 1.43
TDP1-216ENST00000556867 DENND1BQ6P3S1 775 aa24■■□□□ 1.43
TDP1-216ENST00000556867 FAM71AQ8IYT1 594 aa24■■□□□ 1.43
TDP1-216ENST00000556867 NAA15Q9BXJ9 866 aaKnown RBP24■■□□□ 1.43
TDP1-216ENST00000556867 TBC1D14Q9P2M4 693 aa24■■□□□ 1.43
TDP1-216ENST00000556867 NUDT5Q9UKK9 219 aa24■■□□□ 1.43
TDP1-216ENST00000556867 SH3BP1Q9Y3L3 701 aa24■■□□□ 1.43
TDP1-216ENST00000556867 CACNA1IQ9P0X4 2223 aa23.99■■□□□ 1.43
TDP1-216ENST00000556867 SYCE3A1L190 88 aa23.99■■□□□ 1.43
TDP1-216ENST00000556867 GJA4P35212 333 aa23.99■■□□□ 1.43
TDP1-216ENST00000556867 RPL34P49207 117 aaKnown RBP23.99■■□□□ 1.43
TDP1-216ENST00000556867 DAOAP59103 153 aa23.99■■□□□ 1.43
TDP1-216ENST00000556867 PTK2Q05397 1052 aa23.99■■□□□ 1.43
TDP1-216ENST00000556867 GOLGA8FQ08AF8 430 aa23.99■■□□□ 1.43
TDP1-216ENST00000556867 GOLGA8DPQ0D2H9 430 aa23.99■■□□□ 1.43
TDP1-216ENST00000556867 NR1H3Q13133 447 aa23.99■■□□□ 1.43
TDP1-216ENST00000556867 RAPGEF1Q13905 1077 aa23.99■■□□□ 1.43
TDP1-216ENST00000556867 DRAP1Q14919 205 aaPredicted RBP23.99■■□□□ 1.43
TDP1-216ENST00000556867 APTXQ7Z2E3 356 aaKnown RBP23.99■■□□□ 1.43
TDP1-216ENST00000556867 DHX40Q8IX18 779 aaKnown RBP23.99■■□□□ 1.43
TDP1-216ENST00000556867 STK32AQ8WU08 396 aa23.99■■□□□ 1.43
TDP1-216ENST00000556867 NDRG1Q92597 394 aaKnown RBP23.99■■□□□ 1.43
TDP1-216ENST00000556867 OTUB2Q96DC9 234 aa23.99■■□□□ 1.43
TDP1-216ENST00000556867 GANQ9H2C0 597 aa23.99■■□□□ 1.43
TDP1-216ENST00000556867 SMTNL1A8MU46 457 aa23.98■■□□□ 1.43
TDP1-216ENST00000556867 SCAMP3O14828 347 aaKnown RBP23.98■■□□□ 1.43
TDP1-216ENST00000556867 MDM4O15151 490 aa23.98■■□□□ 1.43
TDP1-216ENST00000556867 PNMA6AP0CW24 399 aaPredicted RBP23.98■■□□□ 1.43
TDP1-216ENST00000556867 IRF1P10914 325 aa23.98■■□□□ 1.43
TDP1-216ENST00000556867 CHRNB1P11230 501 aa23.98■■□□□ 1.43
TDP1-216ENST00000556867 LCP1P13796 627 aa23.98■■□□□ 1.43
TDP1-216ENST00000556867 CDK11BP21127 795 aaKnown RBP23.98■■□□□ 1.43
TDP1-216ENST00000556867 ZNF165P49910 485 aa23.98■■□□□ 1.43
TDP1-216ENST00000556867 PON2Q15165 354 aa23.98■■□□□ 1.43
TDP1-216ENST00000556867 IRGQQ8WZA9 623 aa23.98■■□□□ 1.43
TDP1-216ENST00000556867 WBP2Q969T9 261 aa23.98■■□□□ 1.43
TDP1-216ENST00000556867 CHRDQ9H2X0 955 aa23.98■■□□□ 1.43
TDP1-216ENST00000556867 PCDHGC3Q9UN70 934 aa23.98■■□□□ 1.43
TDP1-216ENST00000556867 SIK3Q9Y2K2 1263 aa23.98■■□□□ 1.43
TDP1-216ENST00000556867 YJEFN3A6XGL0 299 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 E7ENQ6 273 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 TRDMT1O14717 391 aaKnown RBP23.97■■□□□ 1.43
TDP1-216ENST00000556867 GREM1O60565 184 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 FBXO21O94952 628 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 CYP17A1P05093 508 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 CLCN1P35523 988 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 LRRC32Q14392 662 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 SKOR2Q2VWA4 1001 aaPredicted RBP23.97■■□□□ 1.43
TDP1-216ENST00000556867 BTBD8Q5XKL5 378 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 HTR3DQ70Z44 454 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 RSRC2Q7L4I2 434 aaKnown RBP23.97■■□□□ 1.43
TDP1-216ENST00000556867 ADGRG2Q8IZP9 1017 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 IER2Q9BTL4 223 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 IRF2BPLQ9H1B7 796 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 LMAN1LQ9HAT1 526 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 OLA1Q9NTK5 396 aaKnown RBP23.97■■□□□ 1.43
TDP1-216ENST00000556867 MYOFQ9NZM1 2061 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 DAAM1Q9Y4D1 1078 aa23.97■■□□□ 1.43
TDP1-216ENST00000556867 ATP1A3P13637 1013 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 ACADSBP45954 432 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 KLK7P49862 253 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 BPIFB4P59827 614 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 DHCR24Q15392 516 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 TMEM196Q5HYL7 178 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 DGKKQ5KSL6 1271 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 BSPRYQ5W0U4 402 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 SLC47A2Q86VL8 602 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 MIB1Q86YT6 1006 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 C1orf210Q8IVY1 113 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 BBS7Q8IWZ6 715 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 SLC4A5Q9BY07 1137 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 STK33Q9BYT3 514 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 CYTH4Q9UIA0 394 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 RASAL2Q9UJF2 1139 aa23.96■■□□□ 1.43
TDP1-216ENST00000556867 LSM7Q9UK45 103 aaKnown RBP23.96■■□□□ 1.43
TDP1-216ENST00000556867 F8VZ95 297 aa23.95■■□□□ 1.42
TDP1-216ENST00000556867 PIK3R2O00459 728 aa23.95■■□□□ 1.42
TDP1-216ENST00000556867 EFEMP1Q12805 493 aa23.95■■□□□ 1.42
TDP1-216ENST00000556867 CCINQ13939 588 aa23.95■■□□□ 1.42
TDP1-216ENST00000556867 ANGPT1Q15389 498 aa23.95■■□□□ 1.42
TDP1-216ENST00000556867 SYCP1Q15431 976 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms