RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 GNA15P30679 374 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 ATP5C1P36542 298 aaKnown RBP10.9□□□□□ -0.66
SNX6-208ENST00000556712 USP8P40818 1118 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 MFAP3P55082 362 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 YWHAGP61981 247 aaKnown RBP eCLIP10.9□□□□□ -0.66
SNX6-208ENST00000556712 SATB1Q01826 763 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 CSTF1Q05048 431 aaKnown RBP10.9□□□□□ -0.66
SNX6-208ENST00000556712 EFEMP1Q12805 493 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 LRRC32Q14392 662 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 TCP11X2Q5H9J9 407 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 TMEM196Q5HYL7 178 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 CDKAL1Q5VV42 579 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 CAVIN1Q6NZI2 390 aaKnown RBP10.9□□□□□ -0.66
SNX6-208ENST00000556712 PMF1Q6P1K2 205 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 DENND1BQ6P3S1 775 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 C1orf228Q6PIY5 440 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 ALYREFQ86V81 257 aaKnown RBP10.9□□□□□ -0.66
SNX6-208ENST00000556712 C12orf40Q86WS4 652 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 DDX42Q86XP3 938 aaKnown RBP eCLIP10.9□□□□□ -0.66
SNX6-208ENST00000556712 MIB1Q86YT6 1006 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 SIX6OS1Q8N1H7 587 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 ENOX1Q8TC92 643 aaKnown RBP10.9□□□□□ -0.66
SNX6-208ENST00000556712 CLEC4CQ8WTT0 213 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 EZH1Q92800 747 aaPredicted RBP10.9□□□□□ -0.66
SNX6-208ENST00000556712 P2RY13Q9BPV8 354 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 PRMT8Q9NR22 394 aaPredicted RBP10.9□□□□□ -0.66
SNX6-208ENST00000556712 CNTN6Q9UQ52 1028 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 CACNA1HO95180 2353 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 E2F8A0AVK6 867 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 YJEFN3A6XGL0 299 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 E7ENQ6 273 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 TRDMT1O14717 391 aaKnown RBP10.89□□□□□ -0.67
SNX6-208ENST00000556712 THAP12O43422 761 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 HMBSP08397 361 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 OPRD1P41143 372 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 KLK7P49862 253 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 MRE11P49959 708 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 GALK1P51570 392 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 KDSRQ06136 332 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 TYRO3Q06418 890 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 MESP2Q0VG99 397 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 KCNMA1Q12791 1236 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 KRT31Q15323 416 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 DHCR24Q15392 516 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 CNGA2Q16280 664 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 CT47A1Q5JQC4 288 aaPredicted RBP10.89□□□□□ -0.67
SNX6-208ENST00000556712 LY6G5CQ5SRR4 150 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 DPY19L2P1Q6NXN4 242 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 ENOSF1Q7L5Y1 443 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 PASD1Q8IV76 773 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 SFTPA1Q8IWL2 248 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 EDEM1Q92611 657 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 CD101Q93033 1021 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 LSM14BQ9BX40 385 aaKnown RBP10.89□□□□□ -0.67
SNX6-208ENST00000556712 UBXN6Q9BZV1 441 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 POLR3BQ9NW08 1133 aaPredicted RBP10.89□□□□□ -0.67
SNX6-208ENST00000556712 ANO10Q9NW15 660 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 FANCLQ9NW38 375 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 CYTH4Q9UIA0 394 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 DNMT3LQ9UJW3 386 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 DNAJC12Q9UKB3 198 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 KIAA1257Q9ULG3 409 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 FHOD1Q9Y613 1164 aa10.89□□□□□ -0.67
SNX6-208ENST00000556712 FAM170AA1A519 330 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 SLC9A3R1O14745 358 aaPredicted RBP10.88□□□□□ -0.67
SNX6-208ENST00000556712 RNF40O75150 1001 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 STC2O76061 302 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 RALAP11233 206 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 ADH5P11766 374 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 TDGF1P13385 188 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 EEF1GP26641 437 aaKnown RBP10.88□□□□□ -0.67
SNX6-208ENST00000556712 NBL1P41271 181 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 SLC6A11P48066 632 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 PSEN1P49768 467 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 SEC13P55735 322 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 DAOAP59103 153 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 DMWDQ09019 674 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 GRSF1Q12849 480 aaKnown RBP eCLIP10.88□□□□□ -0.67
SNX6-208ENST00000556712 STILQ15468 1287 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 DGKKQ5KSL6 1271 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 PM20D1Q6GTS8 502 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 RHBDF2Q6PJF5 856 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 RSRC2Q7L4I2 434 aaKnown RBP10.88□□□□□ -0.67
SNX6-208ENST00000556712 ADGRG2Q8IZP9 1017 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 AOPEPQ8N6M6 819 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 SLC35F5Q8WV83 523 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 KCTD13Q8WZ19 329 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 SHC3Q92529 594 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 MIS12Q9H081 205 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 IRF2BPLQ9H1B7 796 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 VPS16Q9H269 839 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 CLIC5Q9NZA1 410 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 TJP2Q9UDY2 1190 aa10.88□□□□□ -0.67
SNX6-208ENST00000556712 SLC12A8A0AV02 714 aa10.87□□□□□ -0.67
SNX6-208ENST00000556712 MSI1O43347 362 aaKnown RBP10.87□□□□□ -0.67
SNX6-208ENST00000556712 ADH1CP00326 375 aa10.87□□□□□ -0.67
SNX6-208ENST00000556712 CCR3P51677 355 aa10.87□□□□□ -0.67
SNX6-208ENST00000556712 AMPD2Q01433 879 aa10.87□□□□□ -0.67
SNX6-208ENST00000556712 MYL5Q02045 173 aa10.87□□□□□ -0.67
SNX6-208ENST00000556712 GOLGA8FQ08AF8 430 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms