RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 GNAT1P11488 350 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 ATP5DP30049 168 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 LRPAP1P30533 357 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 L1CAMP32004 1257 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 PTPN9P43378 593 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 NDUFV1P49821 464 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 SLC10A2Q12908 348 aaPredicted RBP10.54□□□□□ -0.72
TMEM260-211ENST00000556648 TFDP2Q14188 446 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 KCNJ11Q14654 390 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 BOLA3Q53S33 107 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 MDH1BQ5I0G3 518 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 CEP128Q6ZU80 1094 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 HFE2Q6ZVN8 426 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 CTU1Q7Z7A3 348 aaKnown RBP10.54□□□□□ -0.72
TMEM260-211ENST00000556648 PCGF5Q86SE9 256 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 TRABD2AQ86V40 505 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 PIGZQ86VD9 579 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 TAX1BP1Q86VP1 789 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 NME8Q8N427 588 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 C3orf58Q8NDZ4 430 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 CENPIQ92674 756 aaPredicted RBP10.54□□□□□ -0.72
TMEM260-211ENST00000556648 FAF2Q96CS3 445 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 NRDE2Q9H7Z3 1164 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 AGO3Q9H9G7 860 aaKnown RBP10.54□□□□□ -0.72
TMEM260-211ENST00000556648 CRTAC1Q9NQ79 661 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 ETNK2Q9NVF9 386 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 RABGEF1Q9UJ41 708 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 AP4E1Q9UPM8 1137 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 CHMP2BQ9UQN3 213 aa10.54□□□□□ -0.72
TMEM260-211ENST00000556648 ATXN2Q99700 1313 aaKnown RBP10.54□□□□□ -0.72
TMEM260-211ENST00000556648 SYNJ2BP-COX16A0A087WUM0 186 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 TCP11X1B4DZS4 312 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 RASA4BC9J798 803 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 E7ESA3 106 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 MDM4O15151 490 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 RASA4O43374 803 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 AVILO75366 819 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 PTPN1P18031 435 aaKnown RBP10.53□□□□□ -0.72
TMEM260-211ENST00000556648 SULT1E1P49888 294 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 CLCNKBP51801 687 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 CACNA2D1P54289 1103 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 BCAR1P56945 870 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 GJA9P57773 515 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 RNASELQ05823 741 aaKnown RBP10.53□□□□□ -0.72
TMEM260-211ENST00000556648 TAF2Q6P1X5 1199 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 FAM131BQ86XD5 332 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 ZDHHC17Q8IUH5 632 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 CACNA2D3Q8IZS8 1091 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 DEFB106AQ8N104 65 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 C4orf33Q8N1A6 199 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 TOP6BLQ8N6T0 577 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 CCDC110Q8TBZ0 833 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 FBF1Q8TES7 1133 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 DYDC1Q8WWB3 177 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 ELAC2Q9BQ52 826 aaKnown RBP10.53□□□□□ -0.72
TMEM260-211ENST00000556648 CCDC77Q9BR77 488 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 PAAF1Q9BRP4 392 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 ZNF670Q9BS34 389 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 SENP6Q9GZR1 1112 aaPredicted RBP10.53□□□□□ -0.72
TMEM260-211ENST00000556648 FAM105AQ9NUU6 356 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 TMEM30AQ9NV96 361 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.53□□□□□ -0.72
TMEM260-211ENST00000556648 COX16Q9P0S2 106 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 A0A1W2PPM1 405 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 CASTOR2A6NHX0 329 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 XPO1O14980 1071 aaKnown RBP10.53□□□□□ -0.72
TMEM260-211ENST00000556648 MGEA5O60502 916 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 KIAA0754O94854 1291 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 TGM2P21980 687 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 ELK3P41970 407 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 MAGEA9P43362 315 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 SCNN1GP51170 649 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 MGAT3Q09327 533 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 ZKSCAN8Q15776 578 aaPredicted RBP10.53□□□□□ -0.72
TMEM260-211ENST00000556648 DPYSL2Q16555 572 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 EFHC2Q5JST6 749 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 GKAP1Q5VSY0 366 aaPredicted RBP10.53□□□□□ -0.72
TMEM260-211ENST00000556648 CLEC20AQ6ZU45 233 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 MICALCLQ6ZW33 695 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 GPRIN1Q7Z2K8 1008 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 TADA2BQ86TJ2 420 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 MAP7D3Q8IWC1 876 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 PYROXD1Q8WU10 500 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 SENP8Q96LD8 212 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 CSPG4P5Q96PW8 444 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 HNRNPABQ99729 332 aaKnown RBP10.53□□□□□ -0.72
TMEM260-211ENST00000556648 MED10Q9BTT4 135 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 DUSP16Q9BY84 665 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 RHOBTB2Q9BYZ6 727 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 FGFR1OP2Q9NVK5 253 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 TSC2P49815 1807 aa10.53□□□□□ -0.72
TMEM260-211ENST00000556648 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.52□□□□□ -0.73
TMEM260-211ENST00000556648 F5H423 210 aaPredicted RBP10.52□□□□□ -0.73
TMEM260-211ENST00000556648 I3L4J1 428 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 M0QZ92 97 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 GABRDO14764 452 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 NRP1O14786 923 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 DAB1O75553 588 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 ZBED1O96006 694 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 GOT1P17174 413 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms