RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 RDH13Q8NBN7 331 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 SCFD1Q8WVM8 642 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 CCDC127Q96BQ5 260 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 CAMK1GQ96NX5 476 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 ACOX2Q99424 681 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 CGRRF1Q99675 332 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 ZDHHC5Q9C0B5 715 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 LRRC27Q9C0I9 530 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 DMAP1Q9NPF5 467 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-221ENST00000556571 DNAJC17Q9NVM6 304 aaKnown RBP12.59□□□□□ -0.39
ACTN1-221ENST00000556571 WDR35Q9P2L0 1181 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 ASXL3Q9C0F0 2248 aa12.58□□□□□ -0.39
ACTN1-221ENST00000556571 VPS37CA5D8V6 355 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-221ENST00000556571 GFRA2O00451 464 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 EIF3DO15371 548 aaKnown RBP eCLIP12.58□□□□□ -0.4
ACTN1-221ENST00000556571 CACNG3O60359 315 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 IRF1P10914 325 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 HOXD13P35453 343 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 MYL6P60660 151 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 SNRPFP62306 86 aaKnown RBP12.58□□□□□ -0.4
ACTN1-221ENST00000556571 C19orf48Q6RUI8 117 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 CCNI2Q6ZMN8 369 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-221ENST00000556571 FAM35AQ86V20 835 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 NAXDQ8IW45 347 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 GLIS3Q8NEA6 775 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 WBP2Q969T9 261 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 SYAP1Q96A49 352 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-221ENST00000556571 TNIP3Q96KP6 325 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 MRGPRX1Q96LB2 322 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 MED10Q9BTT4 135 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 BBS2Q9BXC9 721 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 CCDC86Q9H6F5 360 aaKnown RBP12.58□□□□□ -0.4
ACTN1-221ENST00000556571 AGPAT3Q9NRZ7 376 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 MARK1Q9P0L2 795 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 GMIPQ9P107 970 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 NXF1Q9UBU9 619 aaKnown RBP12.58□□□□□ -0.4
ACTN1-221ENST00000556571 APOBEC2Q9Y235 224 aaKnown RBP12.58□□□□□ -0.4
ACTN1-221ENST00000556571 PCDH15Q96QU1 1955 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 IGSF10Q6WRI0 2623 aa12.58□□□□□ -0.4
ACTN1-221ENST00000556571 A0A087X0B3 334 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 PRRT4C9JH25 899 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 NEDD8-MDP1E9PL57 170 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 GREM1O60565 184 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 TLR5O60602 858 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 TYRP14679 529 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 PDCP20941 246 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 CD6P30203 668 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 CEBPZQ03701 1054 aaKnown RBP12.57□□□□□ -0.4
ACTN1-221ENST00000556571 CYP24A1Q07973 514 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 GOLGA8FQ08AF8 430 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 GOLGA8DPQ0D2H9 430 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 PAQR9Q6ZVX9 377 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 METTL3Q86U44 580 aaKnown RBP12.57□□□□□ -0.4
ACTN1-221ENST00000556571 PDZD3Q86UT5 571 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 PNPLA1Q8N8W4 532 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 XXYLT1Q8NBI6 393 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 ZNF507Q8TCN5 953 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 ZNF516Q92618 1163 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 HPS3Q969F9 1004 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 SMARCD1Q96GM5 515 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 KLF16Q9BXK1 252 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-221ENST00000556571 XYLT2Q9H1B5 865 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 TNMDQ9H2S6 317 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 FBXO44Q9H4M3 255 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 VRTNQ9H8Y1 702 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.57□□□□□ -0.4
ACTN1-221ENST00000556571 LSM7Q9UK45 103 aaKnown RBP12.57□□□□□ -0.4
ACTN1-221ENST00000556571 NFE2L3Q9Y4A8 694 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 MORC2Q9Y6X9 1032 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-221ENST00000556571 KNL1Q8NG31 2342 aa12.57□□□□□ -0.4
ACTN1-221ENST00000556571 A0A1B0GTW7 788 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 TGFB1I1O43294 461 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 PHACTR2O75167 634 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 AP1G2O75843 785 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 CISD3P0C7P0 127 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 MAOBP27338 520 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 ATP5C1P36542 298 aaKnown RBP12.56□□□□□ -0.4
ACTN1-221ENST00000556571 DGKGP49619 791 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 CYP2J2P51589 502 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 GRIK2Q13002 908 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 SLC39A14Q15043 492 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 SOWAHCQ53LP3 525 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-221ENST00000556571 KIAA1324Q6UXG2 1013 aaKnown RBP12.56□□□□□ -0.4
ACTN1-221ENST00000556571 TPGS1Q6ZTW0 290 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 TOGARAM2Q6ZUX3 1019 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 EPM2AIP1Q7L775 607 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-221ENST00000556571 GLRX5Q86SX6 157 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 PDILTQ8N807 584 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 DNASE2BQ8WZ79 361 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 ERLEC1Q96DZ1 483 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 TLR8Q9NR97 1041 aaKnown RBP12.56□□□□□ -0.4
ACTN1-221ENST00000556571 CACNA2D2Q9NY47 1150 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 KIAA1522Q9P206 1035 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-221ENST00000556571 RAD54BQ9Y620 910 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 URB1O60287 2271 aaKnown RBP12.56□□□□□ -0.4
ACTN1-221ENST00000556571 ADAMTS9Q9P2N4 1935 aa12.56□□□□□ -0.4
ACTN1-221ENST00000556571 MEI4A8MW99 385 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 CLIC2O15247 247 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 CBFA2T3O75081 653 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 TBX18O95935 607 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms