RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PRPF6O94906 941 aaKnown RBP14.78□□□□□ -0.04
ACTN1-219ENST00000556432 CLSTN1O94985 981 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 GAP43P17677 238 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 GARTP22102 1010 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 ABCG1P45844 678 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 IL27RAQ6UWB1 636 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 TPGS1Q6ZTW0 290 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 OR5B17Q8NGF7 314 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 PIP4K2CQ8TBX8 421 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 BHMTQ93088 406 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 KIF2CQ99661 725 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 GABRG3Q99928 467 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 SEL1LQ9UBV2 794 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 PCDHB13Q9Y5F0 798 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 ATP8B3O60423 1300 aa14.77□□□□□ -0.04
ACTN1-219ENST00000556432 PTPRJQ12913 1337 aa14.77□□□□□ -0.04
ACTN1-219ENST00000556432 PRRT4C9JH25 899 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 FLRT2O43155 660 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 EIF5BO60841 1220 aaKnown RBP14.77□□□□□ -0.05
ACTN1-219ENST00000556432 ZNF883P0CG24 379 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 TYRP14679 529 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 PTPN1P18031 435 aaKnown RBP14.77□□□□□ -0.05
ACTN1-219ENST00000556432 LONP1P36776 959 aaKnown RBP14.77□□□□□ -0.05
ACTN1-219ENST00000556432 TNNC1P63316 161 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 DUOXA2Q1HG44 320 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 HLA-BQ31612 363 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 LIMS2Q7Z4I7 341 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 SCUBE3Q8IX30 993 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 GPD1LQ8N335 351 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 OVCA2Q8WZ82 227 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 SNX19Q92543 992 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 MED10Q9BTT4 135 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 DPEP3Q9H4B8 488 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 TMEM30AQ9NV96 361 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 GMIPQ9P107 970 aa14.77□□□□□ -0.05
ACTN1-219ENST00000556432 A0A087WV48 116 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 WASH3PC4AMC7 463 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 CACNG3O60359 315 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 IDEP14735 1019 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 DGKGP49619 791 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 CASP5P51878 434 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 GRIN1Q05586 938 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 SUZ12Q15022 739 aaKnown RBP14.76□□□□□ -0.05
ACTN1-219ENST00000556432 FUT11Q495W5 492 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 DCAF12L1Q5VU92 463 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 CACUL1Q86Y37 369 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 PDCD7Q8N8D1 485 aaKnown RBP14.76□□□□□ -0.05
ACTN1-219ENST00000556432 SCAMP5Q8TAC9 235 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 DNASE2BQ8WZ79 361 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 SLC39A7Q92504 469 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 WBP2Q969T9 261 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 STRA6Q9BX79 667 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 CD248Q9HCU0 757 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 TOR4AQ9NXH8 423 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 WDR35Q9P2L0 1181 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 LSM7Q9UK45 103 aaKnown RBP14.76□□□□□ -0.05
ACTN1-219ENST00000556432 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.76□□□□□ -0.05
ACTN1-219ENST00000556432 MAST4O15021 2626 aa14.76□□□□□ -0.05
ACTN1-219ENST00000556432 KALRNO60229 2985 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 A0A1B0GVT2 93 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 ZNF233A6NK53 670 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 A8MXQ7 604 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 BMP15O95972 392 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 TUBP50607 506 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 SLC5A3P53794 718 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 GOLGA8FQ08AF8 430 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 GOLGA8DPQ0D2H9 430 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 ALCAMQ13740 583 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 SURF1Q15526 300 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 B3GALNT2Q8NCR0 500 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 ENGASEQ8NFI3 743 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 CADM4Q8NFZ8 388 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 BAHD1Q8TBE0 780 aaPredicted RBP14.75□□□□□ -0.05
ACTN1-219ENST00000556432 KCNK16Q96T55 309 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 B3GNT5Q9BYG0 378 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.75□□□□□ -0.05
ACTN1-219ENST00000556432 WSB2Q9NYS7 404 aaPredicted RBP14.75□□□□□ -0.05
ACTN1-219ENST00000556432 EIF2B4Q9UI10 523 aaKnown RBP14.75□□□□□ -0.05
ACTN1-219ENST00000556432 BTBD3Q9Y2F9 522 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 NFE2L3Q9Y4A8 694 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 STON1Q9Y6Q2 735 aa14.75□□□□□ -0.05
ACTN1-219ENST00000556432 GFRA2O00451 464 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 SYNCRIPO60506 623 aaKnown RBP14.74□□□□□ -0.05
ACTN1-219ENST00000556432 TLR5O60602 858 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 TACC1O75410 805 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 DLATP10515 647 aaKnown RBP14.74□□□□□ -0.05
ACTN1-219ENST00000556432 ACADMP11310 421 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 OXTRP30559 389 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 TPMTP51580 245 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 WDR72Q3MJ13 1102 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 CBWD2Q8IUF1 395 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 WDR49Q8IV35 697 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 TRIM9Q9C026 710 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 DMAP1Q9NPF5 467 aaPredicted RBP14.74□□□□□ -0.05
ACTN1-219ENST00000556432 USP36Q9P275 1121 aaKnown RBP14.74□□□□□ -0.05
ACTN1-219ENST00000556432 STK17AQ9UEE5 414 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 CCDC39Q9UFE4 941 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 NME7Q9Y5B8 376 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 PCDHGB2Q9Y5G2 931 aa14.74□□□□□ -0.05
ACTN1-219ENST00000556432 KNL1Q8NG31 2342 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms