RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 TMEM79Q9BSE2 394 aa6.09□□□□□ -1.43
PRPF39-209ENST00000556353 ZNF287Q9HBT7 754 aa6.09□□□□□ -1.43
PRPF39-209ENST00000556353 TRNAU1APQ9NX07 287 aaKnown RBP6.09□□□□□ -1.43
PRPF39-209ENST00000556353 MAPKBP1O60336 1514 aa6.09□□□□□ -1.44
PRPF39-209ENST00000556353 PROB1E7EW31 1015 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 RAB27BO00194 218 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 EXOC5O00471 708 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 FCHO1O14526 889 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 INMTO95050 263 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 MAP4K4O95819 1239 aaPredicted RBP6.08□□□□□ -1.44
PRPF39-209ENST00000556353 APEHP13798 732 aaKnown RBP6.08□□□□□ -1.44
PRPF39-209ENST00000556353 TPH1P17752 444 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 ACVR2AP27037 513 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 CPT1AP50416 773 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 GATMP50440 423 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 CCT4P50991 539 aaKnown RBP6.08□□□□□ -1.44
PRPF39-209ENST00000556353 STK3Q13188 491 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 PPP4R4Q6NUP7 873 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 DARS2Q6PI48 645 aaKnown RBP6.08□□□□□ -1.44
PRPF39-209ENST00000556353 SRGAP1Q7Z6B7 1085 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 YAF2Q8IY57 180 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 ZNF398Q8TD17 642 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 PIGOQ8TEQ8 1089 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 CUL5Q93034 780 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 HMCESQ96FZ2 354 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 APIPQ96GX9 242 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 HS6ST2Q96MM7 605 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 COL20A1Q9P218 1284 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 MID2Q9UJV3 735 aa6.08□□□□□ -1.44
PRPF39-209ENST00000556353 CTTNBP2Q8WZ74 1663 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 AQP7P3A6NL99 342 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 GOLIM4O00461 696 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 MGEA5O60502 916 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 TXNP10599 105 aaKnown RBP6.07□□□□□ -1.44
PRPF39-209ENST00000556353 CD19P15391 556 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 GHRHRQ02643 423 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 MAPK7Q13164 816 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 LARS2Q15031 903 aaKnown RBP6.07□□□□□ -1.44
PRPF39-209ENST00000556353 KIAA0753Q2KHM9 967 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 DCDC5Q6ZRR9 648 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 KRT73Q86Y46 540 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 LINC01465Q8N7H1 131 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 NANOGP1Q8N7R0 232 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 FAM156AQ8NDB6 213 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 MAFAQ8NHW3 353 aaPredicted RBP6.07□□□□□ -1.44
PRPF39-209ENST00000556353 OSR1Q8TAX0 266 aaPredicted RBP6.07□□□□□ -1.44
PRPF39-209ENST00000556353 PNISRQ8TF01 805 aaKnown RBP6.07□□□□□ -1.44
PRPF39-209ENST00000556353 IPCEF1Q8WWN9 437 aaPredicted RBP6.07□□□□□ -1.44
PRPF39-209ENST00000556353 WDYHV1Q96HA8 205 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 ZNF668Q96K58 619 aaPredicted RBP6.07□□□□□ -1.44
PRPF39-209ENST00000556353 ZC3H10Q96K80 434 aaKnown RBP6.07□□□□□ -1.44
PRPF39-209ENST00000556353 CHST8Q9H2A9 424 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 FAM83DQ9H4H8 585 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 NKX1-2Q9UD57 310 aaPredicted RBP6.07□□□□□ -1.44
PRPF39-209ENST00000556353 RGS17Q9UGC6 210 aaPredicted RBP6.07□□□□□ -1.44
PRPF39-209ENST00000556353 ITGB1BP2Q9UKP3 347 aa6.07□□□□□ -1.44
PRPF39-209ENST00000556353 MYF5P13349 255 aa6.06□□□□□ -1.44
PRPF39-209ENST00000556353 IL1R1P14778 569 aa6.06□□□□□ -1.44
PRPF39-209ENST00000556353 NR4A2P43354 598 aa6.06□□□□□ -1.44
PRPF39-209ENST00000556353 LAMB3Q13751 1172 aa6.06□□□□□ -1.44
PRPF39-209ENST00000556353 AWAT1Q58HT5 328 aa6.06□□□□□ -1.44
PRPF39-209ENST00000556353 VSTM1Q6UX27 236 aa6.06□□□□□ -1.44
PRPF39-209ENST00000556353 GAR1Q9NY12 217 aaKnown RBP6.06□□□□□ -1.44
PRPF39-209ENST00000556353 PI4KBQ9UBF8 816 aa6.06□□□□□ -1.44
PRPF39-209ENST00000556353 DDX20Q9UHI6 824 aaKnown RBP6.06□□□□□ -1.44
PRPF39-209ENST00000556353 IQGAP2Q13576 1575 aa6.06□□□□□ -1.44
PRPF39-209ENST00000556353 KIAA0586Q9BVV6 1533 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 GOLGA6CA6NDK9 693 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 GOLGA6BA6NDN3 693 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 KRTAP29-1A8MX34 341 aaPredicted RBP6.05□□□□□ -1.44
PRPF39-209ENST00000556353 TSPAN6O43657 245 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 ZBED1O96006 694 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 FGBP02675 491 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 HRGP04196 525 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 PARP1P09874 1014 aaKnown RBP6.05□□□□□ -1.44
PRPF39-209ENST00000556353 GOLGA6DP0CG33 693 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 FAM193AP78312 1265 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 SHC4Q6S5L8 630 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 CHST15Q7LFX5 561 aaPredicted RBP6.05□□□□□ -1.44
PRPF39-209ENST00000556353 MRPL10Q7Z7H8 261 aaKnown RBP6.05□□□□□ -1.44
PRPF39-209ENST00000556353 SESTD1Q86VW0 696 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 MYO1HQ8N1T3 1032 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 ZCWPW1Q9H0M4 648 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 GOLGA6AQ9NYA3 693 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 DKK4Q9UBT3 224 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 RIMKLBQ9ULI2 386 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 MAFFQ9ULX9 164 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 AFG3L2Q9Y4W6 797 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 KIF27Q86VH2 1401 aa6.05□□□□□ -1.44
PRPF39-209ENST00000556353 ABCC2Q92887 1545 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 DISP1Q96F81 1524 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 ABCC10Q5T3U5 1492 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 A8MVJ9 347 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 VSTM5A8MXK1 200 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 H3BNC9 293 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 AGPSO00116 658 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 SOCS2O14508 198 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 TPP1O14773 563 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 SNX2O60749 519 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 PEX2P28328 305 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms