RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 CEP68Q76N32 757 aa13.28□□□□□ -0.28
SNX6-207ENST00000556303 C11orf74Q86VG3 221 aa13.28□□□□□ -0.28
SNX6-207ENST00000556303 TRIML1Q8N9V2 468 aa13.28□□□□□ -0.28
SNX6-207ENST00000556303 TATDN2Q93075 761 aa13.28□□□□□ -0.28
SNX6-207ENST00000556303 ZC3H10Q96K80 434 aaKnown RBP13.28□□□□□ -0.28
SNX6-207ENST00000556303 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.28□□□□□ -0.282e-9■■■■■ 223.6
SNX6-207ENST00000556303 SPHK2Q9NRA0 654 aa13.28□□□□□ -0.28
SNX6-207ENST00000556303 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.28□□□□□ -0.28
SNX6-207ENST00000556303 DNMT3LQ9UJW3 386 aa13.28□□□□□ -0.28
SNX6-207ENST00000556303 LSM7Q9UK45 103 aaKnown RBP13.28□□□□□ -0.28
SNX6-207ENST00000556303 TRIM49BA6NDI0 452 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 AXIN1O15169 862 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 CYP26A1O43174 497 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 GREM1O60565 184 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 RPP40O75818 363 aaKnown RBP13.27□□□□□ -0.29
SNX6-207ENST00000556303 KAT7O95251 611 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 FGFR1OPO95684 399 aaKnown RBP13.27□□□□□ -0.29
SNX6-207ENST00000556303 RARGP13631 454 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 FMO5P49326 533 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 DGKEP52429 567 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 COG7P83436 770 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 HEATR6Q6AI08 1181 aaKnown RBP13.27□□□□□ -0.29
SNX6-207ENST00000556303 TTI2Q6NXR4 508 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 GPRIN1Q7Z2K8 1008 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 TRMT11Q7Z4G4 463 aaKnown RBP13.27□□□□□ -0.29
SNX6-207ENST00000556303 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.27□□□□□ -0.29
SNX6-207ENST00000556303 ETFBKMTQ8IXQ9 262 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 ERCC4Q92889 916 aaPredicted RBP13.27□□□□□ -0.29
SNX6-207ENST00000556303 RMDN1Q96DB5 314 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 ARHGEF4Q9NR80 690 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 MARK1Q9P0L2 795 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 WDR35Q9P2L0 1181 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 NAGPAQ9UK23 515 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 MMP17Q9ULZ9 603 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 PCDHGA5Q9Y5G8 931 aa13.27□□□□□ -0.29
SNX6-207ENST00000556303 A0A1W2PQH9 124 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 CNOT1A5YKK6 2376 aaKnown RBP13.26□□□□□ -0.29
SNX6-207ENST00000556303 PPP1R3GB7ZBB8 358 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 XPO1O14980 1071 aaKnown RBP13.26□□□□□ -0.29
SNX6-207ENST00000556303 SPTBN2O15020 2390 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 ALDH1A2O94788 518 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 TBX18O95935 607 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 PAEPP09466 180 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 VDRP11473 427 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 PGFP49763 221 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 BCAT1P54687 386 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 MARSP56192 900 aaKnown RBP13.26□□□□□ -0.29
SNX6-207ENST00000556303 UBE2HP62256 183 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 STILQ15468 1287 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 CSRP2Q16527 193 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 CCDC40Q4G0X9 1142 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 SGO2Q562F6 1265 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 SMYD5Q6GMV2 418 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 PM20D1Q6GTS8 502 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 BBS7Q8IWZ6 715 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 SCML4Q8N228 414 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 TSTD1Q8NFU3 115 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 NELFBQ8WX92 580 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 XPO6Q96QU8 1125 aaKnown RBP13.26□□□□□ -0.29
SNX6-207ENST00000556303 DCLK3Q9C098 648 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 OSER1Q9NX31 292 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 DEC1Q9P2X7 70 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 HESX1Q9UBX0 185 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 USP18Q9UMW8 372 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 STARD13Q9Y3M8 1113 aa13.26□□□□□ -0.29
SNX6-207ENST00000556303 RALGAPA1Q6GYQ0 2036 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 CCDC192P0DO97 292 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 CD44P16070 742 aaKnown RBP13.25□□□□□ -0.29
SNX6-207ENST00000556303 BMP6P22004 513 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 KIR2DL1P43626 348 aaPredicted RBP13.25□□□□□ -0.29
SNX6-207ENST00000556303 SLC6A11P48066 632 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 BST2Q10589 180 aaKnown RBP13.25□□□□□ -0.29
SNX6-207ENST00000556303 PAK1Q13153 545 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 CRY1Q16526 586 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 USP39Q53GS9 565 aaKnown RBP13.25□□□□□ -0.29
SNX6-207ENST00000556303 C2orf27AQ580R0 203 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 EOGTQ5NDL2 527 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 C10orf120Q5SQS8 335 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 Q6ZNB5 142 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 SCD5Q86SK9 330 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 PIGZQ86VD9 579 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 RASSF3Q86WH2 238 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 PHTF2Q8N3S3 785 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 FAM160A2Q8N612 972 aaPredicted RBP13.25□□□□□ -0.29
SNX6-207ENST00000556303 UBR7Q8N806 425 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 CNOT6LQ96LI5 555 aaKnown RBP13.25□□□□□ -0.29
SNX6-207ENST00000556303 NT5C1BQ96P26 610 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 HHIPQ96QV1 700 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 ARID3AQ99856 593 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 NMUR1Q9HB89 426 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 SEMA4GQ9NTN9 838 aa13.25□□□□□ -0.29
SNX6-207ENST00000556303 TBC1D3BA6NDS4 549 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 CACNG3O60359 315 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 TULP3O75386 442 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 RHOBTB1O94844 696 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 EPN2O95208 641 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 ZBED1O96006 694 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 SETSIPP0DME0 302 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 CHKAP35790 457 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 GCNT1Q02742 428 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms