RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 KRT13P13646 458 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 BDNFP23560 247 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 CDC25CP30307 473 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 ALDH1A3P47895 512 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 PPP3CCP48454 512 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 CCT5P48643 541 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 ARPP19P56211 112 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 RPL10AP62906 217 aaKnown RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 TNNC1P63316 161 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 TUBB4BP68371 445 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 SLC7A9P82251 487 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 KCNMA1Q12791 1236 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 KCNH2Q12809 1159 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 TRPC3Q13507 836 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 EIF4EBP2Q13542 120 aaPredicted RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 ZNF77Q15935 545 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 DDR2Q16832 855 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 RNF43Q68DV7 783 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 PM20D1Q6GTS8 502 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 PDZD4Q76G19 769 aaPredicted RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 CMTM8Q8IZV2 173 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 C12orf29Q8N999 325 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 STKLD1Q8NE28 680 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 ZNF483Q8TF39 744 aaPredicted RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 NOC3LQ8WTT2 800 aaKnown RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 NELL1Q92832 810 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 USP13Q92995 863 aaPredicted RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 CLDN23Q96B33 292 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 SMARCD1Q96GM5 515 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 FAM210AQ96ND0 272 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 FAM83CQ9BQN1 747 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 TASP1Q9H6P5 420 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 CD248Q9HCU0 757 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 CISHQ9NSE2 258 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 ETAA1Q9NY74 926 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 ABI2Q9NYB9 513 aaPredicted RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 PPP2R2CQ9Y2T4 447 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 CAPN7Q9Y6W3 813 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 MYO10Q9HD67 2058 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 NYNRINQ9P2P1 1898 aaKnown RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 A0A1W2PRU2 124 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 FSBPO95073 299 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 SYF2O95926 243 aaKnown RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 PDGFBP01127 241 aaPredicted RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 AFPP02771 609 aaKnown RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 PAEPP09466 180 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 PDGFRBP09619 1106 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 NUDT7P0C024 238 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 P4HA1P13674 534 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 CCDC130P13994 396 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 PON1P27169 355 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 SSTR3P32745 418 aaPredicted RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 CCNHP51946 323 aaPredicted RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 EMP3P54852 163 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 BIRC3Q13489 604 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 STIM1Q13586 685 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 SKIDA1Q1XH10 827 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 TMEM31Q5JXX7 168 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 ARTNQ5T4W7 220 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 PPP1R26Q5T8A7 1209 aaPredicted RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 SDHAF4Q5VUM1 108 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 ACOT1Q86TX2 421 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 TTC30AQ86WT1 665 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 SPATA2LQ8IUW3 424 aaPredicted RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 CCDC105Q8IYK2 499 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 ELMOD1Q8N336 334 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 TMEM105Q8N8V8 129 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 ZSCAN18Q8TBC5 510 aaPredicted RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 GPR152Q8TDT2 470 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 GIPC2Q8TF65 315 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 DEPDC1BQ8WUY9 529 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 ING5Q8WYH8 240 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 KCTD13Q8WZ19 329 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 TFAP2BQ92481 460 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 TMEM176AQ96HP8 235 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 TNIP3Q96KP6 325 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 CNOT6LQ96LI5 555 aaKnown RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 SLC22A12Q96S37 553 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 KCNK16Q96T55 309 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 SH3GL3Q99963 347 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 DUSP16Q9BY84 665 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 OSBPL6Q9BZF3 934 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 SNX25Q9H3E2 840 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 VIPAS39Q9H9C1 493 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 OSER1Q9NX31 292 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 UXTQ9UBK9 157 aaPredicted RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 NXF1Q9UBU9 619 aaKnown RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 SCML2Q9UQR0 700 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 CCL26Q9Y258 94 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 MRPS23Q9Y3D9 190 aaKnown RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 PLXND1Q9Y4D7 1925 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 ATXN2Q99700 1313 aaKnown RBP4.12□□□□□ -1.75
LINC00648-202ENST00000555985 EML5Q05BV3 1969 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 C2orf78A6NCI8 922 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 FAM86C2PA6NEL3 165 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 A8MXQ7 604 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 F8VP50 259 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 MYO1FO00160 1098 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 O00370 1275 aa4.12□□□□□ -1.75
LINC00648-202ENST00000555985 CHADO15335 359 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms