RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 KRT7P08729 469 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 PYGMP11217 842 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 NCAM1P13591 858 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 MIPP30301 263 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 YWHAGP61981 247 aaKnown RBP eCLIP10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 LONRF2Q1L5Z9 754 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 ATP13A4Q4VNC1 1196 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 RAB6CQ53S08 254 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 LRRC38Q5VT99 294 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 DCAF12L1Q5VU92 463 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 PLPP4Q5VZY2 271 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 BSPRYQ5W0U4 402 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 BTBD8Q5XKL5 378 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 FAM109BQ6ICB4 259 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 AADACL2Q6P093 401 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 DENND5BQ6ZUT9 1274 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 SPNS2Q8IVW8 549 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 KATNAL2Q8IYT4 538 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 ARFGAP1Q8N6T3 406 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 ZNF461Q8TAF7 563 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 MICAL1Q8TDZ2 1067 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 POF1BQ8WVV4 589 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 EDEM1Q92611 657 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 FBXO32Q969P5 355 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 SPATA17Q96L03 361 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 SAMD11Q96NU1 681 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 SLC2A13Q96QE2 648 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 TBCBQ99426 244 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 TCF25Q9BQ70 676 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 TRIM62Q9BVG3 475 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 EMILIN2Q9BXX0 1053 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 RAB6CQ9H0N0 254 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 RXFP1Q9HBX9 757 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 KLHL11Q9NVR0 708 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 COMMD8Q9NX08 183 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 COX16Q9P0S2 106 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 USP18Q9UMW8 372 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 NAALADL1Q9UQQ1 740 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 LZTS1Q9Y250 596 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 PCDHA11Q9Y5I1 949 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 PLXNA3P51805 1871 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 PI4K2BG5E9Z4 385 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 M0QYT0 321 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 PRRG1O14668 218 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 LILRB3O75022 631 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 ARHGEF15O94989 841 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 ZRANB2O95218 330 aaKnown RBP eCLIP10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 FGGP02679 453 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 RB1P06400 928 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 CA3P07451 260 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 CNPP09543 421 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 ATF2P15336 505 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 TFE3P19532 575 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 KLRC2P26717 231 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 YWHAQP27348 245 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 PCK1P35558 622 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 ALDH1A3P47895 512 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 ERVFC1P60507 584 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 USP46P62068 366 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 SLC25A11Q02978 314 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 UBE3AQ05086 875 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 DEUP1Q05D60 604 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 C2orf54Q08AI8 447 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 NME3Q13232 169 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 MTMR3Q13615 1198 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 CLUL1Q15846 466 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 TAF12Q16514 161 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 SMTNL2Q2TAL5 461 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 SLC25A52Q3SY17 297 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 SYPL2Q5VXT5 272 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 TXNRD3NBQ6F5E7 133 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 STRADAQ7RTN6 431 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 BHLHA9Q7RTU4 235 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 POLNQ7Z5Q5 900 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 RCOR2Q8IZ40 523 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 ARHGAP18Q8N392 663 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 RASGEF1CQ8N431 466 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 LRRN4CLQ8ND94 238 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 MYRIPQ8NFW9 859 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 EXD1Q8NHP7 514 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 SLC7A14Q8TBB6 771 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 SPPL3Q8TCT6 385 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 ACTRT1Q8TDG2 376 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 HSPH1Q92598 858 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 ACSF2Q96CM8 615 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 RBM41Q96IZ5 413 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 RPGRIP1Q96KN7 1286 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 KLHL5Q96PQ7 755 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 TGS1Q96RS0 853 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 NAP1L3Q99457 506 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 NPY6RQ99463 290 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 C11orf84Q9BUA3 381 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 MFRPQ9BY79 579 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 FAM204AQ9H8W3 233 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 ABCC13Q9NSE7 274 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 RRN3Q9NYV6 651 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 GMIPQ9P107 970 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 HSFX1Q9UBD0 423 aa10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 MAGED2Q9UNF1 606 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-220ENST00000555585 SCML2Q9UQR0 700 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms