RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 PCDHGB5Q9Y5G0 923 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 E9PBE3 544 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 KLHL41O60662 606 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 ATP6V1B1P15313 513 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 PEX2P28328 305 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 YWHAZP63104 245 aaKnown RBP17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 TRNP1Q6NT89 227 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 KRT27Q7Z3Y8 459 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 SLC44A1Q8WWI5 657 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 AGAP3Q96P47 875 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 TMPRSS4Q9NRS4 437 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 METTL18O95568 372 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 TBXAS1P24557 533 aaPredicted RBP17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 DUOXA2Q1HG44 320 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 RABGAP1LQ5R372 815 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 PTAR1Q7Z6K3 402 aaPredicted RBP17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 CRLF3Q8IUI8 442 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 DEPDC1BQ8WUY9 529 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 MARK4Q96L34 752 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 IRAK4Q9NWZ3 460 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 AFG3L2Q9Y4W6 797 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 GREB1LQ9C091 1923 aaPredicted RBP17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 C10orf71Q711Q0 1435 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 PMM2O15305 246 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 ZC3H11AO75152 810 aaKnown RBP eCLIP17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 NFICP08651 508 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 RANBP1P43487 201 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 CLCN3P51790 818 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 GBE1Q04446 702 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 TRIP10Q15642 601 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 XKR3Q5GH77 459 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 IRGCQ6NXR0 463 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 ATG14Q6ZNE5 492 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 NSUN6Q8TEA1 469 aaKnown RBP17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 GCNAQ96QF7 691 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 STX18Q9P2W9 335 aaKnown RBP17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 LNPEPQ9UIQ6 1025 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 STRIP2Q9ULQ0 834 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 SLC4A7Q9Y6M7 1214 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 TM9SF1O15321 606 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 BCAR1P56945 870 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 MCL1Q07820 350 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 SFT2D3Q587I9 215 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 ABHD15Q6UXT9 468 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 BBS12Q6ZW61 710 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 SULF1Q8IWU6 871 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 IFT122Q9HBG6 1241 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 PLA2G4CQ9UP65 541 aa17.7■□□□□ 0.42
PPP4R3A-208ENST00000555462 CCR10P46092 362 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 AQP4P55087 323 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 AP1B1Q10567 949 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 DLG1Q12959 904 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 CDC16Q13042 620 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 STX3Q13277 289 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 TMEM132BQ14DG7 1078 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 CWF19L1Q69YN2 538 aaKnown RBP17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 CMC1Q7Z7K0 106 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 CLMNQ96JQ2 1002 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 PSAT1Q9Y617 370 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 SLX4Q8IY92 1834 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 KRT37O76014 449 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 C6orf163Q5TEZ5 329 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 DPY19L2Q6NUT2 758 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 UNC5AQ6ZN44 842 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 SLC26A11Q86WA9 606 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 CPB2Q96IY4 423 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 WDR35Q9P2L0 1181 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 FIS1Q9Y3D6 152 aa17.69■□□□□ 0.42
PPP4R3A-208ENST00000555462 WDR27A2RRH5 827 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 WDR46O15213 610 aaKnown RBP17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 DCXO43602 365 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 PRPSAP2O60256 369 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 OATP04181 439 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 KRT7P08729 469 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 SNRPAP09012 282 aaKnown RBP17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 RABGGTBP53611 331 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 CUL3Q13618 768 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 FASTKD1Q53R41 847 aaKnown RBP17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 GJC2Q5T442 439 aaPredicted RBP17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 VCPIP1Q96JH7 1222 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 PORCNQ9H237 461 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 TEX264Q9Y6I9 313 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 TRAFD1O14545 582 aaPredicted RBP17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 PLSCR1O15162 318 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 PYGLP06737 847 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 SUPT20HL2P0C7V6 817 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 OSBPP22059 807 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 SUPT20HL1Q3ZLR7 823 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 RNF111Q6ZNA4 994 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 XYLT1Q86Y38 959 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 PHTF2Q8N3S3 785 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 PIP4K2CQ8TBX8 421 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 CLEC4CQ8WTT0 213 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 APOL2Q9BQE5 337 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 DDX56Q9NY93 547 aaKnown RBP17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 PLLPQ9Y342 182 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 TTLL3Q9Y4R7 772 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 MICAL2O94851 1124 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 FESP07332 822 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 GK3PQ14409 553 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms