RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 M0QYV0 167 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 TRDMT1O14717 391 aaKnown RBP14.37□□□□□ -0.11
SNX6-203ENST00000555416 NCAM2O15394 837 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 ZBED1O96006 694 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 EGFP01133 1207 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 ATP5C1P36542 298 aaKnown RBP14.37□□□□□ -0.11
SNX6-203ENST00000555416 OPRD1P41143 372 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 DHCR24Q15392 516 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 C10orf120Q5SQS8 335 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 SASS6Q6UVJ0 657 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 C12orf40Q86WS4 652 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 FAM114A1Q8IWE2 563 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 CLEC4CQ8WTT0 213 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 SHC3Q92529 594 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 P2RY11Q96G91 374 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 NACA2Q9H009 215 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 HSD3B7Q9H2F3 369 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 POLR3BQ9NW08 1133 aaPredicted RBP14.37□□□□□ -0.11
SNX6-203ENST00000555416 FANCLQ9NW38 375 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 CYTH4Q9UIA0 394 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 R4GN57 208 aa14.37□□□□□ -0.11
SNX6-203ENST00000555416 YJEFN3A6XGL0 299 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 E7ENQ6 273 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 LAMTOR5O43504 91 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 LETM1O95202 739 aaPredicted RBP14.36□□□□□ -0.11
SNX6-203ENST00000555416 SETSIPP0DME0 302 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 TDGF1P13385 188 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 LCP1P13796 627 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 MAGEA9P43362 315 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 SLC6A11P48066 632 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 MFAP3P55082 362 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 YWHAGP61981 247 aaKnown RBP eCLIP14.36□□□□□ -0.11
SNX6-203ENST00000555416 SATB1Q01826 763 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 CSTF1Q05048 431 aaKnown RBP14.36□□□□□ -0.11
SNX6-203ENST00000555416 NCAPHQ15003 741 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 KRT31Q15323 416 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 LY6G5CQ5SRR4 150 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 ALYREFQ86V81 257 aaKnown RBP14.36□□□□□ -0.11
SNX6-203ENST00000555416 DDX42Q86XP3 938 aaKnown RBP eCLIP14.36□□□□□ -0.11
SNX6-203ENST00000555416 MIB1Q86YT6 1006 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 KCTD13Q8WZ19 329 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 VPS16Q9H269 839 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 PRMT8Q9NR22 394 aaPredicted RBP14.36□□□□□ -0.11
SNX6-203ENST00000555416 ANO10Q9NW15 660 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 CLIC5Q9NZA1 410 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 DNMT3LQ9UJW3 386 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 DNAJC12Q9UKB3 198 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 ATG2BQ96BY7 2078 aa14.36□□□□□ -0.11
SNX6-203ENST00000555416 ZFHX2Q9C0A1 2572 aaPredicted RBP14.35□□□□□ -0.11
SNX6-203ENST00000555416 DMDP11532 3685 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 PIEZO1Q92508 2521 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 FOXN3O00409 490 aaPredicted RBP14.35□□□□□ -0.11
SNX6-203ENST00000555416 STC2O76061 302 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 NFATC1O95644 943 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 KLKB1P03952 638 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 HMBSP08397 361 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 EEF1GP26641 437 aaKnown RBP14.35□□□□□ -0.11
SNX6-203ENST00000555416 USP8P40818 1118 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 NBL1P41271 181 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 GPD2P43304 727 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 KLK7P49862 253 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 MRE11P49959 708 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 SLC8A3P57103 927 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 TYRO3Q06418 890 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 EFEMP1Q12805 493 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 STX1AQ16623 288 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 CAVIN1Q6NZI2 390 aaKnown RBP14.35□□□□□ -0.11
SNX6-203ENST00000555416 KLHDC10Q6PID8 442 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 C1orf228Q6PIY5 440 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 Q6ZNB5 142 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 HTR3DQ70Z44 454 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 ENOSF1Q7L5Y1 443 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 TMEM25Q86YD3 366 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 ZNF276Q8N554 614 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 KIAA1958Q8N8K9 716 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 ZNF606Q8WXB4 792 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 EDEM1Q92611 657 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 P2RY13Q9BPV8 354 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 LRRC4Q9HBW1 653 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 TJP2Q9UDY2 1190 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 RASAL2Q9UJF2 1139 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 SH3BP1Q9Y3L3 701 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 FHOD1Q9Y613 1164 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 USP34Q70CQ2 3546 aa14.35□□□□□ -0.11
SNX6-203ENST00000555416 PES1O00541 588 aaKnown RBP14.34□□□□□ -0.11
SNX6-203ENST00000555416 SLC9A3R1O14745 358 aaPredicted RBP14.34□□□□□ -0.11
SNX6-203ENST00000555416 THAP12O43422 761 aa14.34□□□□□ -0.11
SNX6-203ENST00000555416 CHRM1P11229 460 aaPredicted RBP14.34□□□□□ -0.11
SNX6-203ENST00000555416 GNA15P30679 374 aa14.34□□□□□ -0.11
SNX6-203ENST00000555416 CLCN1P35523 988 aa14.34□□□□□ -0.11
SNX6-203ENST00000555416 RPL34P49207 117 aaKnown RBP14.34□□□□□ -0.11
SNX6-203ENST00000555416 PSEN1P49768 467 aa14.34□□□□□ -0.11
SNX6-203ENST00000555416 DAOAP59103 153 aa14.34□□□□□ -0.11
SNX6-203ENST00000555416 DMWDQ09019 674 aa14.34□□□□□ -0.11
SNX6-203ENST00000555416 GRSF1Q12849 480 aaKnown RBP eCLIP14.34□□□□□ -0.11
SNX6-203ENST00000555416 LRRC32Q14392 662 aa14.34□□□□□ -0.11
SNX6-203ENST00000555416 DGKKQ5KSL6 1271 aa14.34□□□□□ -0.11
SNX6-203ENST00000555416 BSPRYQ5W0U4 402 aa14.34□□□□□ -0.11
SNX6-203ENST00000555416 MAMSTRQ6ZN01 415 aa14.34□□□□□ -0.11
SNX6-203ENST00000555416 SIX6OS1Q8N1H7 587 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms