RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 HSF2BPO75031 334 aa10.65□□□□□ -0.7
NEK9-205ENST00000555405 LRG1P02750 347 aa10.65□□□□□ -0.7
NEK9-205ENST00000555405 FAM163BP0C2L3 166 aa10.65□□□□□ -0.7
NEK9-205ENST00000555405 SRGAP2BP0DMP2 458 aa10.65□□□□□ -0.7
NEK9-205ENST00000555405 PAX3P23760 479 aa10.65□□□□□ -0.7
NEK9-205ENST00000555405 TUFMP49411 452 aaKnown RBP10.65□□□□□ -0.7
NEK9-205ENST00000555405 MMRN1Q13201 1228 aa10.65□□□□□ -0.7
NEK9-205ENST00000555405 PHOSPHO2Q8TCD6 241 aa10.65□□□□□ -0.7
NEK9-205ENST00000555405 RAPGEF5Q92565 580 aa10.65□□□□□ -0.7
NEK9-205ENST00000555405 SLITRK1Q96PX8 696 aa10.65□□□□□ -0.7
NEK9-205ENST00000555405 CORO1BQ9BR76 489 aa10.65□□□□□ -0.7
NEK9-205ENST00000555405 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.65□□□□□ -0.7
NEK9-205ENST00000555405 SAE1Q9UBE0 346 aaPredicted RBP10.65□□□□□ -0.7
NEK9-205ENST00000555405 STAP1Q9ULZ2 295 aa10.65□□□□□ -0.7
NEK9-205ENST00000555405 CHD9Q3L8U1 2897 aa10.65□□□□□ -0.7
NEK9-205ENST00000555405 DOCK6Q96HP0 2047 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.65□□□□□ -0.71
NEK9-205ENST00000555405 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.65□□□□□ -0.71
NEK9-205ENST00000555405 CD48P09326 243 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 CETN2P41208 172 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 ERCC6LQ2NKX8 1250 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 CFAP221Q4G0U5 840 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 VSTM1Q6UX27 236 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 ZNF662Q6ZS27 426 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 PYROXD2Q8N2H3 581 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 KREMEN2Q8NCW0 462 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.65□□□□□ -0.71
NEK9-205ENST00000555405 STK32AQ8WU08 396 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 C1orf54Q8WWF1 131 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 UBXN4Q92575 508 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 KHSRPQ92945 711 aaKnown RBP eCLIP10.65□□□□□ -0.71
NEK9-205ENST00000555405 MAK16Q9BXY0 300 aaKnown RBP10.65□□□□□ -0.71
NEK9-205ENST00000555405 CNGB3Q9NQW8 809 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 YIPF1Q9Y548 306 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 MRFAP1Q9Y605 127 aa10.65□□□□□ -0.71
NEK9-205ENST00000555405 SZT2Q5T011 3432 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 UQCRHLA0A096LP55 91 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 TCRBV7S2A1N4TA0A589 114 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 BTNL10A8MVZ5 291 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 TRIM66O15016 1216 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 TUBB4AP04350 444 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 ADH1AP07327 375 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 C8AP07357 584 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 UQCRHP07919 91 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 RARAP10276 462 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 CTSAP10619 480 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 HAPLN1P10915 354 aaPredicted RBP10.64□□□□□ -0.71
NEK9-205ENST00000555405 RALAP11233 206 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 ATF2P15336 505 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 IGFBP4P22692 258 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 VPS41P49754 854 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 ZNF143P52747 638 aaPredicted RBP10.64□□□□□ -0.71
NEK9-205ENST00000555405 SLC7A5Q01650 507 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 TAP1Q03518 808 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 RFX6Q8HWS3 928 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.64□□□□□ -0.71
NEK9-205ENST00000555405 C11orf84Q9BUA3 381 aaPredicted RBP10.64□□□□□ -0.71
NEK9-205ENST00000555405 EMILIN2Q9BXX0 1053 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 C10orf88Q9H8K7 445 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 PIDD1Q9HB75 910 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 AFF4Q9UHB7 1163 aaKnown RBP10.64□□□□□ -0.71
NEK9-205ENST00000555405 TMEM59LQ9UK28 342 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 SLC38A8A6NNN8 435 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 HHLA1C9JL84 531 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 TRUB2O95900 331 aaKnown RBP10.64□□□□□ -0.71
NEK9-205ENST00000555405 GLUD1P00367 558 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 EPCAMP16422 314 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 ATF6P18850 670 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 GTF2F1P35269 517 aaKnown RBP eCLIP10.64□□□□□ -0.71
NEK9-205ENST00000555405 GABRB2P47870 512 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 KCNJ1P48048 391 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 EPHB3P54753 998 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 PAPD7Q5XG87 772 aaKnown RBP10.64□□□□□ -0.71
NEK9-205ENST00000555405 MFSD7Q6UXD7 560 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 SLC26A9Q7LBE3 791 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 ARFGAP1Q8N6T3 406 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 ATG4AQ8WYN0 398 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 CYP2S1Q96SQ9 504 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 KRT12Q99456 494 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 PKMYT1Q99640 499 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 ADAM33Q9BZ11 813 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 DDX47Q9H0S4 455 aaKnown RBP10.64□□□□□ -0.71
NEK9-205ENST00000555405 FAM124BQ9H5Z6 455 aaPredicted RBP10.64□□□□□ -0.71
NEK9-205ENST00000555405 CCSER2Q9H7U1 834 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 TLE6Q9H808 572 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 RALGAPA2Q2PPJ7 1873 aa10.64□□□□□ -0.71
NEK9-205ENST00000555405 FNDC1Q4ZHG4 1894 aaPredicted RBP10.64□□□□□ -0.71
NEK9-205ENST00000555405 SLC12A8A0AV02 714 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 DDX3YO15523 660 aaKnown RBP10.63□□□□□ -0.71
NEK9-205ENST00000555405 FBXO21O94952 628 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 VNN2O95498 520 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 RARGP13631 454 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 MATKP42679 507 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 CA9Q16790 459 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 RASIP1Q5U651 963 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 SLC8B1Q6J4K2 584 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 C11orf63Q6NUN7 778 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 RWDD4Q6NW29 188 aaKnown RBP10.63□□□□□ -0.71
NEK9-205ENST00000555405 TMC5Q6UXY8 1006 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 SND1Q7KZF4 910 aaKnown RBP eCLIP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms