RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 DOCK5Q9H7D0 1870 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 BRWD1Q9NSI6 2320 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 C5orf67F2Z3F1 127 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 NUAK1O60285 661 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 GPR32O75388 356 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 LYPLA2O95372 231 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 C22orf31O95567 290 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 AMHP03971 560 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 CA3P07451 260 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 MYOGP15173 224 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 FOSL2P15408 326 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 XBP1P17861 261 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 KLRC1P26715 233 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 APEX1P27695 318 aaKnown RBP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 MC4RP32245 332 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 JAK3P52333 1124 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 RABGGTBP53611 331 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 CRYBB1P53674 252 aaPredicted RBP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 EPHB1P54762 984 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 ITGA1P56199 1179 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 BCAR1P56945 870 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 SCAND1P57086 179 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 DEFB103AP81534 67 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 MRPS6P82932 125 aaKnown RBP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 CDC42EP1Q00587 391 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 SLC6A3Q01959 620 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 ADCY2Q08462 1091 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 ST3GAL1Q11201 340 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 PPP2R5CQ13362 524 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 NONOQ15233 471 aaKnown RBP eCLIP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 PRR16Q569H4 304 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 SWSAP1Q6NVH7 229 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 TSHZ1Q6ZSZ6 1077 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 NEK8Q86SG6 692 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 LINC00482Q8N8I6 264 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 MAFAQ8NHW3 353 aaPredicted RBP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 DNAJB3Q8WWF6 145 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 HAS1Q92839 578 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 ZSCAN31Q96LW9 406 aaPredicted RBP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 AIFM3Q96NN9 605 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 SMAD5Q99717 465 aaKnown RBP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 GORASP1Q9BQQ3 440 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 C11orf84Q9BUA3 381 aaPredicted RBP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 IFIH1Q9BYX4 1025 aaKnown RBP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 TRIM8Q9BZR9 551 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 POFUT1Q9H488 388 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 AGO3Q9H9G7 860 aaKnown RBP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 CD320Q9NPF0 282 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 TOPORSQ9NS56 1045 aaPredicted RBP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 NRBP2Q9NSY0 501 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 ORC3Q9UBD5 711 aaPredicted RBP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 NAP1L2Q9ULW6 460 aaPredicted RBP4.62□□□□□ -1.67
CPSF2-204ENST00000555244 LIMCH1Q9UPQ0 1083 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 TRPV2Q9Y5S1 764 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 MRFAP1Q9Y605 127 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 MTCH2Q9Y6C9 303 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 PTPRSQ13332 1948 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 MICAL3Q7RTP6 2002 aa4.62□□□□□ -1.67
CPSF2-204ENST00000555244 GBF1Q92538 1859 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 LINC01553A4QN01 128 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 EPOPA6NHQ4 379 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 RFXAPO00287 272 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 GABRDO14764 452 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 DKC1O60832 514 aaKnown RBP eCLIP4.61□□□□□ -1.67
CPSF2-204ENST00000555244 PRPF6O94906 941 aaKnown RBP4.61□□□□□ -1.67
CPSF2-204ENST00000555244 LARGE1O95461 756 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 TDP2O95551 362 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 MPIG6BO95866 241 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 MMP1P03956 469 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 RB1P06400 928 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 MYBL2P10244 700 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 XRCC6P12956 609 aaKnown RBP eCLIP4.61□□□□□ -1.67
CPSF2-204ENST00000555244 CCND1P24385 295 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 MARK3P27448 753 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 GLRBP48167 497 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 NEK2P51955 445 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 LINC00310P59036 64 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 PSMC5P62195 406 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 SP4Q02446 784 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 NFATC3Q12968 1075 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 STK3Q13188 491 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 ORC2Q13416 577 aaPredicted RBP4.61□□□□□ -1.67
CPSF2-204ENST00000555244 XKR3Q5GH77 459 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 EARS2Q5JPH6 523 aaKnown RBP4.61□□□□□ -1.67
CPSF2-204ENST00000555244 LRCH2Q5VUJ6 765 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 KIAA1841Q6NSI8 718 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 CXXC5Q7LFL8 322 aaKnown RBP4.61□□□□□ -1.67
CPSF2-204ENST00000555244 ZBTB46Q86UZ6 589 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 CXorf67Q86X51 503 aaPredicted RBP4.61□□□□□ -1.67
CPSF2-204ENST00000555244 C4orf19Q8IY42 314 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 EXOC8Q8IYI6 725 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 SLC17A8Q8NDX2 589 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 ATXN2LQ8WWM7 1075 aaKnown RBP4.61□□□□□ -1.67
CPSF2-204ENST00000555244 RSPH1Q8WYR4 309 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 ZBTB8AQ96BR9 441 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 MTMR9Q96QG7 549 aa4.61□□□□□ -1.67
CPSF2-204ENST00000555244 TGS1Q96RS0 853 aaKnown RBP4.61□□□□□ -1.67
CPSF2-204ENST00000555244 HSD17B14Q9BPX1 270 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms