RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 FNDC7Q5VTL7 733 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 KAZNQ674X7 775 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 NFRKBQ6P4R8 1299 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 SPRED1Q7Z699 444 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 LRRC71Q8N4P6 559 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 METTL25Q8N6Q8 603 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 OR1N1Q8NGS0 311 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 RP9Q8TA86 221 aaKnown RBP6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 SPPL3Q8TCT6 385 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 RFKQ969G6 155 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 EVI5LQ96CN4 794 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 EIF3CQ99613 913 aaKnown RBP6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 GPR20Q99678 358 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 NAP1L4Q99733 375 aaKnown RBP6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 TTPALQ9BTX7 342 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 FSCN3Q9NQT6 498 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 DKK3Q9UBP4 350 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 CCNL1Q9UK58 526 aaPredicted RBP6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 GABRQQ9UN88 632 aa6.23□□□□□ -1.41
CKS1BP1-201ENST00000555221 FER1L4A9Z1Z3 1794 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 VWC2LB2RUY7 222 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 ORC4O43929 436 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 TAF5LO75529 589 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 FAM155BO75949 473 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 URI1O94763 535 aaPredicted RBP6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 NR2F6P10588 404 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 GYS1P13807 737 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 MAPK9P45984 424 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 PNLIPRP1P54315 467 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 P3H1Q32P28 736 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 TMEM196Q5HYL7 178 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 FBXO47Q5MNV8 452 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 MTHFD1LQ6UB35 978 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 CYP26C1Q6V0L0 522 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 USP51Q70EK9 711 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 ZNF551Q7Z340 670 aaPredicted RBP6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 WDR53Q7Z5U6 358 aaPredicted RBP6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 MOGAT3Q86VF5 341 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 CLASRPQ8N2M8 674 aaKnown RBP6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 SLC44A3Q8N4M1 653 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 SIRT6Q8N6T7 355 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 THAP4Q8WY91 577 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 OVCA2Q8WZ82 227 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 TFAP2BQ92481 460 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 SDCCAG3Q96C92 435 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 CYP4F11Q9HBI6 524 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 SEPSECSQ9HD40 501 aaKnown RBP6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 ARHGEF3Q9NR81 526 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 RXFP3Q9NSD7 469 aa6.22□□□□□ -1.41
CKS1BP1-201ENST00000555221 TMPRSS11DO60235 418 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 PMPCBO75439 489 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 DRD1P21728 446 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 ADD2P35612 726 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 PBX1P40424 430 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 MRPS35P82673 323 aaKnown RBP6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 MTAPQ13126 283 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 MPP3Q13368 585 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 TAF12Q16514 161 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 TBC1D25Q3MII6 688 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 DENND2CQ68D51 928 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 PARS2Q7L3T8 475 aaKnown RBP6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 TRABD2AQ86V40 505 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 OR6Y1Q8NGX8 325 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 SCAMP5Q8TAC9 235 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 WDYHV1Q96HA8 205 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 TBATAQ96M53 351 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 TRAPPC9Q96Q05 1148 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 ZNF341Q9BYN7 854 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 BRD8Q9H0E9 1235 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 MMRN2Q9H8L6 949 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 SAGE1Q9NXZ1 904 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 PGAP2Q9UHJ9 254 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 DAPP1Q9UN19 280 aa6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 C19orf53Q9UNZ5 99 aaPredicted RBP6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 LRRFIP2Q9Y608 721 aaKnown RBP6.21□□□□□ -1.42
CKS1BP1-201ENST00000555221 TJP3O95049 919 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 LARGE1O95461 756 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 ESRRBO95718 433 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 ADRB1P08588 477 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 CREB1P16220 341 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 ADRA1DP25100 572 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 CDK7P50613 346 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 PAPOLAP51003 745 aaKnown RBP6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 E2F1Q01094 437 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 SEMA3BQ13214 749 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 EFR3AQ14156 821 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 KCNJ12Q14500 433 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 CYP1B1Q16678 543 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 BTBD16Q32M84 506 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 PIK3AP1Q6ZUJ8 805 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 Q6ZWC4 215 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 P3H2Q8IVL5 708 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 SUGP1Q8IWZ8 645 aaKnown RBP6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 FTSJ3Q8IY81 847 aaKnown RBP6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 PAF1Q8N7H5 531 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 LINC00476Q8WZB0 136 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 CPT1BQ92523 772 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 SLC9A6Q92581 669 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 CAVIN3Q969G5 261 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms