RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 RAB6CQ9H0N0 254 aa22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 GJD2Q9UKL4 321 aa22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 MANSC4A6NHS7 340 aaPredicted RBP22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 SPTLC1O15269 473 aa22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 KPNA6O60684 536 aa22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 DNAJC8O75937 253 aaPredicted RBP22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 SCTRP47872 440 aa22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 SLC8A3P57103 927 aa22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 SPATA21Q7Z572 469 aa22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 GDAP1Q8TB36 358 aa22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 FBF1Q8TES7 1133 aa22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 SOCS4Q8WXH5 440 aa22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 WDR83Q9BRX9 315 aaKnown RBP22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 NRDE2Q9H7Z3 1164 aa22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 RCOR3Q9P2K3 495 aaPredicted RBP22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 ARL2BPQ9Y2Y0 163 aa22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 IPPQ9Y573 584 aa22.12■■□□□ 1.13
ARHGEF40-204ENST00000555038 FOXO6A8MYZ6 492 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 DNM1LO00429 736 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 KCNN4O15554 427 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 ZWINTO95229 277 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 CCDC130P13994 396 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 ADORA2BP29275 332 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 SSTR1P30872 391 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 GBP2P32456 591 aaPredicted RBP22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 MSH2P43246 934 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 WDR4P57081 412 aaKnown RBP22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 GAD2Q05329 585 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 MTFR1Q15390 333 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 CAPN12Q6ZSI9 719 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 ADGRF2Q8IZF7 708 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 PAFAH2Q99487 392 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 HNRNPABQ99729 332 aaKnown RBP22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 B3GNT5Q9BYG0 378 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 PNPLA8Q9NP80 782 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 TEX264Q9Y6I9 313 aa22.11■■□□□ 1.13
ARHGEF40-204ENST00000555038 TYROBPO43914 113 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 IGHA2P01877 340 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 TAC1P20366 129 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 CYP2F1P24903 491 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 L1CAMP32004 1257 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 CHADLQ6NUI6 762 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 MCUQ8NE86 351 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 LRRC39Q96DD0 335 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 APBA2Q99767 749 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 RAB6BQ9NRW1 208 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 GPATCH2LQ9NWQ4 482 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 BANF1O75531 89 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 GSTA2P09210 222 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 PDGFRBP09619 1106 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 LILRA4P59901 499 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 CA9Q16790 459 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 BZW1Q7L1Q6 419 aaKnown RBP22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 SMG8Q8ND04 991 aaKnown RBP22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 SLC2A14Q8TDB8 520 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 MLXIPLQ9NP71 852 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 KLK14Q9P0G3 267 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 PRKAG3Q9UGI9 489 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 SLC12A4Q9UP95 1085 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 AP4E1Q9UPM8 1137 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 HEY1Q9Y5J3 304 aa22.1■■□□□ 1.13
ARHGEF40-204ENST00000555038 CA4P22748 312 aa22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 LMO2P25791 158 aa22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 RBL1P28749 1068 aa22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 MATKP42679 507 aa22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 TAF1CQ15572 869 aaPredicted RBP22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 PDK4Q16654 411 aa22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 FSCN1Q16658 493 aaKnown RBP22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 SLC45A4Q5BKX6 768 aa22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 B3GALNT2Q8NCR0 500 aa22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 KCTD13Q8WZ19 329 aa22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 DUSP16Q9BY84 665 aa22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 RNF39Q9H2S5 420 aa22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 SLC38A7Q9NVC3 462 aa22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 HAUS2Q9NVX0 235 aa22.09■■□□□ 1.13
ARHGEF40-204ENST00000555038 IQANK1A0A1B0GTG1 560 aa22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 DAB1O75553 588 aa22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 GCATO75600 419 aa22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 ZNF189O75820 626 aaPredicted RBP22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 LCP1P13796 627 aa22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 ELK3P41970 407 aa22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 SOX4Q06945 474 aaPredicted RBP22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 PPP6R3Q5H9R7 873 aaPredicted RBP22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 HACE1Q8IYU2 909 aa22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 MZB1Q8WU39 189 aa22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 DCAKDQ8WVC6 231 aa22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 ETNK2Q9NVF9 386 aa22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 CHMP2BQ9UQN3 213 aa22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 STARD13Q9Y3M8 1113 aa22.08■■□□□ 1.13
ARHGEF40-204ENST00000555038 HACD1B0YJ81 288 aa22.07■■□□□ 1.12
ARHGEF40-204ENST00000555038 IGF2BP3O00425 579 aaKnown RBP eCLIP22.07■■□□□ 1.12
ARHGEF40-204ENST00000555038 TM9SF1O15321 606 aa22.07■■□□□ 1.12
ARHGEF40-204ENST00000555038 SPAG7O75391 227 aa22.07■■□□□ 1.12
ARHGEF40-204ENST00000555038 PURAQ00577 322 aaKnown RBP22.07■■□□□ 1.12
ARHGEF40-204ENST00000555038 SLC25A52Q3SY17 297 aa22.07■■□□□ 1.12
ARHGEF40-204ENST00000555038 RNF43Q68DV7 783 aa22.07■■□□□ 1.12
ARHGEF40-204ENST00000555038 C17orf99Q6UX52 265 aa22.07■■□□□ 1.12
ARHGEF40-204ENST00000555038 LENG1Q96BZ8 264 aaPredicted RBP22.07■■□□□ 1.12
ARHGEF40-204ENST00000555038 QKIQ96PU8 341 aaKnown RBP eCLIP22.07■■□□□ 1.122e-7■■■■■ 28.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms