RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 EFR3BQ9Y2G0 817 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 PHF20L1A8MW92 1017 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 H3BN98 237 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 ADCY6O43306 1168 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CCT8P50990 548 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CEP68Q76N32 757 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 KCNS3Q9BQ31 491 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 GOLPH3Q9H4A6 298 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 RIBC2Q9H4K1 309 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 BTBD3Q9Y2F9 522 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 SNX13Q9Y5W8 968 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 TRIM64A6NGJ6 449 aa7.09□□□□□ -1.28
SYNE2-216ENST00000555002 TRIM49D1C9J1S8 452 aa7.09□□□□□ -1.28
SYNE2-216ENST00000555002 OPLAHO14841 1288 aa7.09□□□□□ -1.28
SYNE2-216ENST00000555002 SLC1A1P43005 524 aa7.09□□□□□ -1.28
SYNE2-216ENST00000555002 SERPINB8P50452 374 aa7.09□□□□□ -1.28
SYNE2-216ENST00000555002 COPAP53621 1224 aa7.09□□□□□ -1.28
SYNE2-216ENST00000555002 SCRN3Q0VDG4 424 aa7.09□□□□□ -1.28
SYNE2-216ENST00000555002 PIGHQ14442 188 aaPredicted RBP7.09□□□□□ -1.28
SYNE2-216ENST00000555002 MAT2BQ9NZL9 334 aa7.09□□□□□ -1.28
SYNE2-216ENST00000555002 PAK5Q9P286 719 aa7.09□□□□□ -1.28
SYNE2-216ENST00000555002 PSTPIP1O43586 416 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 CNOT3O75175 753 aaKnown RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 BAIAP3O94812 1187 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 EN1Q05925 392 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 KRR1Q13601 381 aaKnown RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 KLHL12Q53G59 568 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 ANGEL2Q5VTE6 544 aaKnown RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 AGAP9Q5VTM2 703 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 GRIN3AQ8TCU5 1115 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 KLHL28Q9NXS3 571 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 CASZ1Q86V15 1759 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 ZNF185O15231 689 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 HLA-DRAP01903 254 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 SNRPAP09012 282 aaKnown RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 SLC2A4P14672 509 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 MYBPC1Q00872 1141 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 BOP1Q14137 746 aaKnown RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 IKBIPQ70UQ0 350 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 AGGF1Q8N302 714 aaeCLIP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 PIGBQ92521 554 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 USP13Q92995 863 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 MANSC1Q9H8J5 431 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 TRPM5Q9NZQ8 1165 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 SLC12A8A0AV02 714 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 SLC16A3O15427 465 aaKnown RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 UQCRBP14927 111 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 KLRC2P26717 231 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 DHX34Q14147 1143 aaKnown RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 SNAP47Q5SQN1 464 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 DNAJC9Q8WXX5 260 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 SMPD4Q9NXE4 827 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 KIF1CO43896 1103 aaKnown RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 ATG7O95352 703 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 ALOX12P18054 663 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 BAATQ14032 418 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 TMEM138Q9NPI0 162 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 CNTNAP2Q9UHC6 1331 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 A8MX80 341 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 EXOSC10Q01780 885 aaKnown RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 PLEKHA7Q6IQ23 1121 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 UNC5CLQ8IV45 518 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 COL26A1Q96A83 441 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 EXOC2Q96KP1 924 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 FAM153AQ9UHL3 310 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 ENTPD4Q9Y227 616 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 ZNF286BP0CG31 522 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 TARSP26639 723 aaKnown RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 CPB2Q96IY4 423 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 FAM20AQ96MK3 541 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 TLR8Q9NR97 1041 aaKnown RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 LRCH1Q9Y2L9 728 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 AP4S1Q9Y587 144 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 PFASO15067 1338 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 TSPAN19P0C672 248 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 IFNAR1P17181 557 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 RHOAP61586 193 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 MARK2Q7KZI7 788 aaKnown RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 KIRREL3Q8IZU9 778 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 CERKQ8TCT0 537 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 APOL2Q9BQE5 337 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 TOR4AQ9NXH8 423 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 MARK1Q9P0L2 795 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 SPEF1Q9Y4P9 236 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 ERBB4Q15303 1308 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 MCIDASD6RGH6 385 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 ASNA1O43681 348 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 EPHB2P29323 1055 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 GEMP55040 296 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 CDC42EP1Q00587 391 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 PTPN12Q05209 780 aaKnown RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 KIAA0408Q6ZU52 694 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 SKA1Q96BD8 255 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 NSL1Q96IY1 281 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 BHLHE41Q9C0J9 482 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 ARIH1Q9Y4X5 557 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-216ENST00000555002 KDM5CP41229 1560 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 XRCC4Q13426 336 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 NR6A1Q15406 480 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms