RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 TOP3BO95985 862 aaKnown RBP13.19□□□□□ -0.3
RDH11-207ENST00000554731 C4BPAP04003 597 aaKnown RBP13.19□□□□□ -0.3
RDH11-207ENST00000554731 RPN1P04843 607 aaKnown RBP13.19□□□□□ -0.3
RDH11-207ENST00000554731 GFPT1Q06210 699 aaPredicted RBP13.19□□□□□ -0.3
RDH11-207ENST00000554731 GOLGA8FQ08AF8 430 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 GOLGA8DPQ0D2H9 430 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 CUL4BQ13620 913 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 DUOXA1Q1HG43 343 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 SGSM1Q2NKQ1 1148 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 SDE2Q6IQ49 451 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 HTR3DQ70Z44 454 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 ZMIZ2Q8NF64 920 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 SLC2A14Q8TDB8 520 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 ELMO3Q96BJ8 720 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 XPO6Q96QU8 1125 aaKnown RBP13.19□□□□□ -0.3
RDH11-207ENST00000554731 SCNM1Q9BWG6 230 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 BBS2Q9BXC9 721 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 DNAJC17Q9NVM6 304 aaKnown RBP13.19□□□□□ -0.3
RDH11-207ENST00000554731 CALCOCO1Q9P1Z2 691 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 WDR35Q9P2L0 1181 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 LSM7Q9UK45 103 aaKnown RBP13.19□□□□□ -0.3
RDH11-207ENST00000554731 ZMIZ1Q9ULJ6 1067 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 SLC6A14Q9UN76 642 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 STARD13Q9Y3M8 1113 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 PLXND1Q9Y4D7 1925 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 FRYQ5TBA9 3013 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 ZFHX4Q86UP3 3567 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 UPK3BL1B0FP48 263 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 UPK3BL2E5RIL1 263 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 NEDD8-MDP1E9PL57 170 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 TRIM24O15164 1050 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 CACNG3O60359 315 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 ZNF217O75362 1048 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 BEST1O76090 585 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 SERPINF2P08697 491 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 TRIM21P19474 475 aaKnown RBP13.18□□□□□ -0.3
RDH11-207ENST00000554731 ATP5C1P36542 298 aaKnown RBP13.18□□□□□ -0.3
RDH11-207ENST00000554731 WASP42768 502 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 ME1P48163 572 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 PGFP49763 221 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 NDST1P52848 882 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 MAP3K7CLP57077 242 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 ZNF33AQ06730 810 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 ORC1Q13415 861 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 FOXD4L5Q5VV16 416 aaPredicted RBP13.18□□□□□ -0.3
RDH11-207ENST00000554731 EGFLAMQ63HQ2 1017 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 UNC93AQ86WB7 457 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 MIB1Q86YT6 1006 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 SLC9A9Q8IVB4 645 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 CEP57L1Q8IYX8 460 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 CHPFQ8IZ52 775 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 CRYBG2Q8N1P7 616 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 HDDC3Q8N4P3 179 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 DEFB119Q8N690 84 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 FOXD4L4Q8WXT5 416 aaPredicted RBP13.18□□□□□ -0.3
RDH11-207ENST00000554731 TAF4BQ92750 862 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 GTPBP2Q9BX10 602 aaKnown RBP13.18□□□□□ -0.3
RDH11-207ENST00000554731 KLF16Q9BXK1 252 aaPredicted RBP13.18□□□□□ -0.3
RDH11-207ENST00000554731 CSNK1G1Q9HCP0 422 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 FAM49BQ9NUQ9 324 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 EXOC1Q9NV70 894 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 DMAC2Q9NW81 257 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 HCN2Q9UL51 889 aa13.18□□□□□ -0.3
RDH11-207ENST00000554731 IGHV1OR15-9A0A0B4J2B8 117 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 A0A1W2PQF6 199 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 GREM1O60565 184 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 TBX18O95935 607 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 FAM200BP0CF97 657 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 TYRP14679 529 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 ADORA2BP29275 332 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 SIM1P81133 766 aaPredicted RBP13.17□□□□□ -0.3
RDH11-207ENST00000554731 SEMA3BQ13214 749 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 FOXD4L6Q3SYB3 417 aaPredicted RBP13.17□□□□□ -0.3
RDH11-207ENST00000554731 ZACNQ401N2 412 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 RESP18Q5W5W9 173 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 KIAA1211LQ6NV74 962 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 FOXD4L3Q6VB84 417 aaPredicted RBP13.17□□□□□ -0.3
RDH11-207ENST00000554731 TPGS1Q6ZTW0 290 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 PIP4P1Q86T03 277 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 GRAMD1CQ8IYS0 662 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 C12orf29Q8N999 325 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 TMC2Q8TDI7 906 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 IPO4Q8TEX9 1081 aaKnown RBP13.17□□□□□ -0.3
RDH11-207ENST00000554731 TMEM174Q8WUU8 243 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 GATA6Q92908 595 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 ACOX2Q99424 681 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
RDH11-207ENST00000554731 CAPN10Q9HC96 672 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 CYLDQ9NQC7 956 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.17□□□□□ -0.3
RDH11-207ENST00000554731 MARK1Q9P0L2 795 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 HMGXB4Q9UGU5 601 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 RALYQ9UKM9 306 aaKnown RBP13.17□□□□□ -0.3
RDH11-207ENST00000554731 PCDHA7Q9UN72 937 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 CYP8B1Q9UNU6 501 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 SCML2Q9UQR0 700 aa13.17□□□□□ -0.3
RDH11-207ENST00000554731 TNRC6BQ9UPQ9 1833 aaKnown RBP13.17□□□□□ -0.3
RDH11-207ENST00000554731 IKBKBO14920 756 aa13.16□□□□□ -0.3
RDH11-207ENST00000554731 CYP26A1O43174 497 aa13.16□□□□□ -0.3
RDH11-207ENST00000554731 HYAL3O43820 417 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms