RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 TAF5Q15542 800 aa15.02■□□□□ -0
SHOX2-206ENST00000554685 SLC25A52Q3SY17 297 aa15.02■□□□□ -0
SHOX2-206ENST00000554685 DCAF6Q58WW2 860 aa15.02■□□□□ -0
SHOX2-206ENST00000554685 STRADAQ7RTN6 431 aa15.02■□□□□ -0
SHOX2-206ENST00000554685 BHLHA9Q7RTU4 235 aa15.02■□□□□ -0
SHOX2-206ENST00000554685 RHOT1Q8IXI2 618 aa15.02■□□□□ -0
SHOX2-206ENST00000554685 RNF139Q8WU17 664 aa15.02■□□□□ -0
SHOX2-206ENST00000554685 SLC22A17Q8WUG5 538 aa15.02■□□□□ -0
SHOX2-206ENST00000554685 NDRG1Q92597 394 aaKnown RBP15.02■□□□□ -0
SHOX2-206ENST00000554685 ZNF592Q92610 1267 aa15.02■□□□□ -0
SHOX2-206ENST00000554685 ZNF512Q96ME7 567 aaPredicted RBP15.02■□□□□ -0
SHOX2-206ENST00000554685 TUBB2BQ9BVA1 445 aa15.02■□□□□ -0
SHOX2-206ENST00000554685 ZNF576Q9H609 170 aa15.02■□□□□ -0
SHOX2-206ENST00000554685 ZDHHC7Q9NXF8 308 aa15.02■□□□□ -0
SHOX2-206ENST00000554685 MAGED2Q9UNF1 606 aaPredicted RBP15.02■□□□□ -0
SHOX2-206ENST00000554685 CEP290O15078 2479 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 XYLBO75191 536 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 ZMYND10O75800 440 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 FGF19O95750 216 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 F9P00740 461 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 POU2F2P09086 479 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 SPATA31D3P0C874 917 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 SRGAP2BP0DMP2 458 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 TCP1P17987 556 aaKnown RBP15.01□□□□□ -0.01
SHOX2-206ENST00000554685 CTNNA2P26232 953 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 GBP1P32455 592 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 SSR1P43307 286 aaKnown RBP15.01□□□□□ -0.01
SHOX2-206ENST00000554685 SULT1E1P49888 294 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 USP46P62068 366 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 ZNF252P-AS1Q0IIN9 211 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 DUSP6Q16828 381 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 CCDC14Q49A88 953 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 PABPC1LQ4VXU2 614 aaKnown RBP15.01□□□□□ -0.01
SHOX2-206ENST00000554685 LRRC38Q5VT99 294 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 CC2D1AQ6P1N0 951 aaPredicted RBP15.01□□□□□ -0.01
SHOX2-206ENST00000554685 SPATA31D4Q6ZUB0 917 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 RSRC2Q7L4I2 434 aaKnown RBP15.01□□□□□ -0.01
SHOX2-206ENST00000554685 DNAJB7Q7Z6W7 309 aaPredicted RBP15.01□□□□□ -0.01
SHOX2-206ENST00000554685 ZNF276Q8N554 614 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 STKLD1Q8NE28 680 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 GPR152Q8TDT2 470 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 HES6Q96HZ4 224 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 CFAP57Q96MR6 1250 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 NPY6RQ99463 290 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 MAN1C1Q9NR34 630 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 TRPM5Q9NZQ8 1165 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 LMCD1Q9NZU5 365 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 GMIPQ9P107 970 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 USTQ9Y2C2 406 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 HYOU1Q9Y4L1 999 aa15.01□□□□□ -0.01
SHOX2-206ENST00000554685 A0A1W2PQH9 124 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 KRT7P08729 469 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 ZDHHC11BP0C7U3 371 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 PRLRP16471 622 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 HMGA1P17096 107 aaKnown RBP15□□□□□ -0.01
SHOX2-206ENST00000554685 CTNNA1P35221 906 aaKnown RBP15□□□□□ -0.01
SHOX2-206ENST00000554685 RDXP35241 583 aaKnown RBP15□□□□□ -0.01
SHOX2-206ENST00000554685 MTMR3Q13615 1198 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 SNX30Q5VWJ9 437 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 PAPD7Q5XG87 772 aaKnown RBP15□□□□□ -0.01
SHOX2-206ENST00000554685 TRNP1Q6NT89 227 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 MSANTD2Q6P1R3 559 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 HFE2Q6ZVN8 426 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 SND1Q7KZF4 910 aaKnown RBP eCLIP15□□□□□ -0.01
SHOX2-206ENST00000554685 POLNQ7Z5Q5 900 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 SCD5Q86SK9 330 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 LEMD2Q8NC56 503 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 FAM172AQ8WUF8 416 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 CENPIQ92674 756 aaPredicted RBP15□□□□□ -0.01
SHOX2-206ENST00000554685 NT5C3BQ969T7 300 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 PGAP3Q96FM1 320 aaPredicted RBP15□□□□□ -0.01
SHOX2-206ENST00000554685 GCNAQ96QF7 691 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 GOLPH3Q9H4A6 298 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 NSUN3Q9H649 340 aaKnown RBP15□□□□□ -0.01
SHOX2-206ENST00000554685 DZANK1Q9NVP4 752 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 SNX12Q9UMY4 172 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 NAALADL1Q9UQQ1 740 aa15□□□□□ -0.01
SHOX2-206ENST00000554685 EPOPA6NHQ4 379 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 M0QYT0 321 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 ENC1O14682 589 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 PRPSAP2O60256 369 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 LRCH4O75427 683 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 ENDOD1O94919 500 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 ATP1A1P05023 1023 aaKnown RBP14.99□□□□□ -0.01
SHOX2-206ENST00000554685 FYNP06241 537 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 RARGP13631 454 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 TUBP50607 506 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 AIF1P55008 147 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 RWDD2BP57060 319 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 ATP11AP98196 1134 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 DEUP1Q05D60 604 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 CDO1Q16878 200 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 C15orf59Q2T9L4 293 aaPredicted RBP14.99□□□□□ -0.01
SHOX2-206ENST00000554685 ODF2Q5BJF6 829 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 ADGRD2Q7Z7M1 963 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 EDEM1Q92611 657 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 CASP10Q92851 521 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 CD101Q93033 1021 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 SERPINB11Q96P15 392 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 TBCBQ99426 244 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms