RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 UBXN6Q9BZV1 441 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 CYLDQ9NQC7 956 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.21□□□□□ -0.61
SHMT2-213ENST00000554600 OSER1Q9NX31 292 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 RASAL2Q9UJF2 1139 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 DNMT3LQ9UJW3 386 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 GVINP1Q7Z2Y8 2422 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 CEP192Q8TEP8 1941 aa11.21□□□□□ -0.62
SHMT2-213ENST00000554600 WDR87Q6ZQQ6 2873 aa11.21□□□□□ -0.62
SHMT2-213ENST00000554600 KCNJ18B7U540 433 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 PIK3R2O00459 728 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 RNF40O75150 1001 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 LETM1O95202 739 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-213ENST00000554600 MBD3O95983 291 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 ZBED1O96006 694 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 HMBSP08397 361 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 ADH5P11766 374 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 SLC9A1P19634 815 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 DRD1P21728 446 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 PLA2G4AP47712 749 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 MFAP3P55082 362 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 YWHAGP61981 247 aaKnown RBP eCLIP11.2□□□□□ -0.62
SHMT2-213ENST00000554600 SATB1Q01826 763 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 CCINQ13939 588 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 KCNJ12Q14500 433 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 STILQ15468 1287 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 CNGA2Q16280 664 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 ANO4Q32M45 955 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 LY6G5CQ5SRR4 150 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 BTBD8Q5XKL5 378 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 HEATR6Q6AI08 1181 aaKnown RBP11.2□□□□□ -0.62
SHMT2-213ENST00000554600 TRIM65Q6PJ69 517 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 LCLAT1Q6UWP7 414 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 SCD5Q86SK9 330 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 BBS7Q8IWZ6 715 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 ADGRG2Q8IZP9 1017 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 SYNPOQ8N3V7 929 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 NDRG1Q92597 394 aaKnown RBP11.2□□□□□ -0.62
SHMT2-213ENST00000554600 SECISBP2LQ93073 1101 aaKnown RBP11.2□□□□□ -0.62
SHMT2-213ENST00000554600 WBP2Q969T9 261 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 ZFRQ96KR1 1074 aaKnown RBP11.2□□□□□ -0.62
SHMT2-213ENST00000554600 CDK5RAP1Q96SZ6 601 aaKnown RBP11.2□□□□□ -0.62
SHMT2-213ENST00000554600 TUBGCP2Q9BSJ2 902 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 KLF16Q9BXK1 252 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-213ENST00000554600 FBRSL1Q9HCM7 1045 aaKnown RBP11.2□□□□□ -0.62
SHMT2-213ENST00000554600 SAMSN1Q9NSI8 373 aaKnown RBP11.2□□□□□ -0.62
SHMT2-213ENST00000554600 CLIC5Q9NZA1 410 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 USP3Q9Y6I4 520 aa11.2□□□□□ -0.62
SHMT2-213ENST00000554600 GON4LQ3T8J9 2241 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 PRR23AA6NEV1 266 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 THAP12O43422 761 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 NRLP54845 237 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 APBA1Q02410 837 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 KDSRQ06136 332 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 GAS6Q14393 721 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 ZNF528Q3MIS6 628 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 RAB41Q5JT25 222 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 RHBDF2Q6PJF5 856 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 ENOSF1Q7L5Y1 443 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 ABCA7Q8IZY2 2146 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 KIAA1958Q8N8K9 716 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 NAT16Q8N8M0 369 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 RNF139Q8WU17 664 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 OTUB2Q96DC9 234 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 FAM81BQ96LP2 452 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 HINFPQ9BQA5 517 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 NDST4Q9H3R1 872 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 PRMT8Q9NR22 394 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-213ENST00000554600 ST7Q9NRC1 585 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 ZSCAN32Q9NX65 697 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 MARCH2Q9P0N8 246 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 APEX2Q9UBZ4 518 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 STRIP2Q9ULQ0 834 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.19□□□□□ -0.62
SHMT2-213ENST00000554600 NFE2L3Q9Y4A8 694 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 NUP205Q92621 2012 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 GPR179Q6PRD1 2367 aa11.19□□□□□ -0.62
SHMT2-213ENST00000554600 SLC12A8A0AV02 714 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 GTPBP10A4D1E9 387 aaKnown RBP11.18□□□□□ -0.62
SHMT2-213ENST00000554600 PROB1E7EW31 1015 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 MED7O43513 233 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 ATG13O75143 517 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 APODP05090 189 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 TPM2P07951 284 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 PON1P27169 355 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 GNA15P30679 374 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 OPRD1P41143 372 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 SLC6A11P48066 632 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 ZNF132P52740 706 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 SEC13P55735 322 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 COG7P83436 770 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 GAD2Q05329 585 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 STX1AQ16623 288 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 FBXO43Q4G163 708 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 VWA3BQ502W6 1294 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 CT47A1Q5JQC4 288 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-213ENST00000554600 CCDC183Q5T5S1 534 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 PMF1Q6P1K2 205 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 PKN3Q6P5Z2 889 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 KLHDC10Q6PID8 442 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms