RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 PLEKHG1Q9ULL1 1385 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CCDC162PA2VCL2 907 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ERI2A8K979 691 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 RGS5O15539 181 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 OAZ2O95190 189 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ATP5F1P24539 256 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 MAGEA9P43362 315 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 EVX2Q03828 476 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TP53BP2Q13625 1128 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 C9orf152Q5JTZ5 239 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 C15orf52Q6ZUT6 534 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 OR10Q1Q8NGQ4 319 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 BRSK1Q8TDC3 778 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 FOPNLQ96NB1 174 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 GORASP1Q9BQQ3 440 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 INTS13Q9NVM9 706 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SPACA6W5XKT8 324 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 MED13LQ71F56 2210 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CCL22O00626 93 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CYP1A2P05177 515 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 RWDD2BP57060 319 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 OCLNQ16625 522 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 PPM1LQ5SGD2 360 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SYT15Q9BQS2 421 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SETD4Q9NVD3 440 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 WDR17Q8IZU2 1322 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 RASGRF2O14827 1237 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SNPHO15079 494 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 FBXO21O94952 628 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ZBTB11O95625 1053 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 LRPAP1P30533 357 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 MASP1P48740 699 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CTXN3Q4LDR2 81 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 FIG4Q92562 907 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TMEM169Q96HH4 297 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 BBS4Q96RK4 519 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 GMLQ99445 158 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CNPPD1Q9BV87 410 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 RAD21L1Q9H4I0 556 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CYP39A1Q9NYL5 469 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 RPS6KA6Q9UK32 745 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 PASKQ96RG2 1323 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 HYKKA2RU49 373 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SOWAHDA6NJG2 315 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CKBP12277 381 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 GAP43P17677 238 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TNFAIP2Q03169 654 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TTI2Q6NXR4 508 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 OTUB1Q96FW1 271 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ACAD9Q9H845 621 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF395Q9H8N7 513 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 PHF20L1A8MW92 1017 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SMAPO00193 183 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CENPCQ03188 943 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 UBXN2BQ14CS0 331 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SYT2Q8N9I0 419 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 RNF149Q8NC42 400 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 BEST2Q8NFU1 509 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CCT8L2Q96SF2 557 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ZFYVE28Q9HCC9 887 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ZMYM5Q9UJ78 669 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ZFP69BQ9UJL9 534 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 PCDHA7Q9UN72 937 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TIAM1Q13009 1591 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 IQCF5A8MTL0 148 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 MTRF1O75570 445 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ATP1A3P13637 1013 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TBX2Q13207 712 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 MAPK6Q16659 721 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 C12orf50Q8NA57 414 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TRIM54Q9BYV2 358 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 STOML2Q9UJZ1 356 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ATXN2Q99700 1313 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 UHRF1BP1Q6BDS2 1440 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 EME2A4GXA9 379 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 E2F3O00716 465 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 COL19A1Q14993 1142 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 KBTBD3Q8NAB2 608 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 LPAR1Q92633 364 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 OSBPL1AQ9BXW6 950 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 PARD6BQ9BYG5 372 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CXorf56Q9H5V9 222 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 BRD7Q9NPI1 651 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 AXIN2Q9Y2T1 843 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ISM1B1AKI9 464 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 DEXIO95424 95 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 NELFEP18615 380 aaKnown RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 RPL4P36578 427 aaKnown RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ATPAF1Q5TC12 328 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 LRRC8BQ6P9F7 803 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 DENND5BQ6ZUT9 1274 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 KCT2Q8NC54 265 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 KLHL32Q96NJ5 620 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ADAM22Q9P0K1 906 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 MSRAQ9UJ68 235 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 TMCC3Q9ULS5 477 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 NR5A2O00482 541 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 GYG2O15488 501 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 TLL1O43897 1013 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 SRP72O76094 671 aaKnown RBP3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms