RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ARP10275 920 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 MYCLP12524 364 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-211ENST00000554437 EGR1P18146 543 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 MST1P26927 711 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 PPM1AP35813 382 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 TECP42680 631 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 EIF4A1P60842 406 aaKnown RBP5.95□□□□□ -1.46
SCFD1-211ENST00000554437 PSG6Q00889 435 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 OS9Q13438 667 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-211ENST00000554437 ARHGAP15Q53QZ3 475 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 ABLIM2Q6H8Q1 611 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 DNAJC10Q8IXB1 793 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 CYP2W1Q8TAV3 490 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 ZNF384Q8TF68 577 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 NELL1Q92832 810 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 CTHRC1Q96CG8 243 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 WDYHV1Q96HA8 205 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 VPS50Q96JG6 964 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 THAP7Q9BT49 309 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-211ENST00000554437 TM7SF3Q9NS93 570 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 SLC39A10Q9ULF5 831 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 LRCH1Q9Y2L9 728 aa5.95□□□□□ -1.46
SCFD1-211ENST00000554437 TARM1B6A8C7 271 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 TMPRSS11DO60235 418 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 PLA2G6O60733 806 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 TMEM225BP0DP42 221 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 PECAM1P16284 738 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-211ENST00000554437 HTR7P34969 479 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 HOXA4Q00056 320 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-211ENST00000554437 STARD3Q14849 445 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 CLCA4Q14CN2 919 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 MAPKAPK3Q16644 382 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 ST3GAL2Q16842 350 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 SLC5A9Q2M3M2 681 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 DENND2CQ68D51 928 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 C1orf228Q6PIY5 440 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 SFTPA1Q8IWL2 248 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 TERB1Q8NA31 727 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 NGDNQ8NEJ9 315 aaKnown RBP5.94□□□□□ -1.46
SCFD1-211ENST00000554437 SUN3Q8TAQ9 357 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 MUL1Q969V5 352 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 GRAMD1AQ96CP6 724 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 C18orf8Q96DM3 657 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 DAZAP1Q96EP5 407 aaKnown RBP5.94□□□□□ -1.46
SCFD1-211ENST00000554437 STK33Q9BYT3 514 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 CIPCQ9C0C6 399 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 SNX15Q9NRS6 342 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 TFCP2L1Q9NZI6 479 aa5.94□□□□□ -1.46
SCFD1-211ENST00000554437 MAGED2Q9UNF1 606 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-211ENST00000554437 COL15A1P39059 1388 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 PLEKHD1A6NEE1 506 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 A8MVJ9 347 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 ADAMTS3O15072 1205 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 ZSCAN9O15535 394 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-211ENST00000554437 PROP1O75360 226 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 WDR47O94967 919 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 SRGAP2BP0DMP2 458 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 SLC5A2P31639 672 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 DIO1P49895 249 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 LMAN2Q12907 356 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 FHL3Q13643 280 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 RAB30Q15771 203 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 RNASE12Q5GAN4 147 aaKnown RBP5.93□□□□□ -1.46
SCFD1-211ENST00000554437 SUMO4Q6EEV6 95 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 TRIM72Q6ZMU5 477 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 P3H2Q8IVL5 708 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 TMEM41AQ96HV5 264 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 CRAMP1Q96RY5 1269 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 PLCB1Q9NQ66 1216 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 NECTIN3Q9NQS3 549 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 SERGEFQ9UGK8 458 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 TAGLN3Q9UI15 199 aa5.93□□□□□ -1.46
SCFD1-211ENST00000554437 ABHD14A-ACY1A0A1B0GW23 586 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 SMIM22K7EJ46 135 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 PPFIA2O75334 1257 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 VIPP01282 170 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 MCM5P33992 734 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 NSUN2Q08J23 767 aaKnown RBP eCLIP5.92□□□□□ -1.46
SCFD1-211ENST00000554437 BIRC2Q13490 618 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 ATP1A4Q13733 1029 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 MORC3Q14149 939 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 ACOX1Q15067 660 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 TMTC4Q5T4D3 741 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 FCRLBQ6BAA4 426 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 GGT6Q6P531 493 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 KIRREL2Q6UWL6 708 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 SPICE1Q8N0Z3 855 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 VPS37AQ8NEZ2 397 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 IPO4Q8TEX9 1081 aaKnown RBP5.92□□□□□ -1.46
SCFD1-211ENST00000554437 REPS1Q96D71 796 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 MMS19Q96T76 1030 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 TTLL2Q9BWV7 592 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 ASAP1Q9ULH1 1129 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 COX11Q9Y6N1 276 aa5.92□□□□□ -1.46
SCFD1-211ENST00000554437 PEX14O75381 377 aa5.91□□□□□ -1.46
SCFD1-211ENST00000554437 ADRA1DP25100 572 aa5.91□□□□□ -1.46
SCFD1-211ENST00000554437 IL6STP40189 918 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-211ENST00000554437 PBX1P40424 430 aa5.91□□□□□ -1.46
SCFD1-211ENST00000554437 COPB1P53618 953 aaKnown RBP5.91□□□□□ -1.46
SCFD1-211ENST00000554437 NANOS3P60323 173 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms