RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 CCDC26Q8TAB7 109 aa14.84□□□□□ -0.03
SPTLC2-202ENST00000554365 SPATA18Q8TC71 538 aa14.84□□□□□ -0.03
SPTLC2-202ENST00000554365 MYLPFQ96A32 169 aa14.84□□□□□ -0.03
SPTLC2-202ENST00000554365 ANKRD36BP1Q96IX9 119 aa14.84□□□□□ -0.03
SPTLC2-202ENST00000554365 SYT15Q9BQS2 421 aa14.84□□□□□ -0.03
SPTLC2-202ENST00000554365 USP24Q9UPU5 2620 aa14.83□□□□□ -0.03
SPTLC2-202ENST00000554365 EPHB6O15197 1021 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 CST3P01034 146 aaPredicted RBP14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 HLA-DRAP01903 254 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 TNNC2P02585 160 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 BDNFP23560 247 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 LMO2P25791 158 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 GRIK1P39086 918 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 MAGEA11P43364 429 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 CYP27A1Q02318 531 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 EXOC3L4Q17RC7 722 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 DAB2IPQ5VWQ8 1189 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 FAM171BQ6P995 826 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 GBP6Q6ZN66 633 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 DPH6Q7L8W6 267 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 CCDC33Q8N5R6 958 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 EHBP1Q8NDI1 1231 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 USP33Q8TEY7 942 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 HPDLQ96IR7 371 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 INTS2Q9H0H0 1204 aaKnown RBP14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 GANQ9H2C0 597 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 TRPM5Q9NZQ8 1165 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 CDH9Q9ULB4 789 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 ARHGAP26Q9UNA1 814 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 ITIH6Q6UXX5 1313 aa14.83□□□□□ -0.04
SPTLC2-202ENST00000554365 LNP1A1A4G5 178 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 ANTXRLA6NF34 631 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 K7EQS6 105 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 LEFTY2O00292 366 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 GIPC1O14908 333 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 KHNYNO15037 678 aaKnown RBP14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 TPM3P06753 285 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 PDGFRBP09619 1106 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 ANXA13P27216 316 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 OPRD1P41143 372 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 PDE6CP51160 858 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 USP46P62068 366 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 ZXDBP98169 803 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 TBX2Q13207 712 aaPredicted RBP14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 PMS2CLQ68D20 193 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 TRIM65Q6PJ69 517 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 VSTM1Q6UX27 236 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 CYP2U1Q7Z449 544 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 C11orf74Q86VG3 221 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 FBXL13Q8NEE6 735 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 KBTBD7Q8WVZ9 684 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 ELMO3Q96BJ8 720 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 PDLIM2Q96JY6 352 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 SPATA17Q96L03 361 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 MMS19Q96T76 1030 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 TTYH3Q9C0H2 523 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 XYLT2Q9H1B5 865 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 PLCB1Q9NQ66 1216 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 CRTAC1Q9NQ79 661 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 RAB20Q9NX57 234 aa14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 AJAP1Q9UKB5 411 aaPredicted RBP14.82□□□□□ -0.04
SPTLC2-202ENST00000554365 CNOT1A5YKK6 2376 aaKnown RBP14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 KIAA1549LQ6ZVL6 1849 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 RNF225M0QZC1 329 aaPredicted RBP14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 SCAMP3O14828 347 aaKnown RBP14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 ABL1P00519 1130 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 TCF3P15923 654 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 BCKDHBP21953 392 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 PIK3CAP42336 1068 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 DHPSP49366 369 aaPredicted RBP14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 MYL6P60660 151 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 ZNF252P-AS1Q0IIN9 211 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 FOXC1Q12948 553 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 BIRC3Q13489 604 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 NCOA4Q13772 614 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 MAPRE1Q15691 268 aaKnown RBP14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 SH3PXD2AQ5TCZ1 1133 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 SPECC1LQ69YQ0 1117 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 DENND5BQ6ZUT9 1274 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 APOBEC3GQ9HC16 384 aaKnown RBP14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 TMEM9BQ9NQ34 198 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 RALYQ9UKM9 306 aaKnown RBP14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 MMP17Q9ULZ9 603 aa14.81□□□□□ -0.04
SPTLC2-202ENST00000554365 MYO16Q9Y6X6 1858 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 C1QTNF9BB2RNN3 333 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 PATE3B3GLJ2 98 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 ASS1P00966 412 aaKnown RBP14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 CYP17A1P05093 508 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 PROS1P07225 676 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 C1QTNF9P0C862 333 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 GAB4Q2WGN9 574 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 MDH1BQ5I0G3 518 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 KLHDC7AQ5VTJ3 777 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 SPOPLQ6IQ16 392 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 GJB7Q6PEY0 223 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 TMC6Q7Z403 805 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 RASSF3Q86WH2 238 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 ARHGEF19Q8IW93 802 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 MDGA1Q8NFP4 955 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 PCED1BQ96HM7 432 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms