RNA–Protein interactions for RNA: ENST00000554233.1

IFT43-207, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 635 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-207ENST00000554233 UBXN11Q5T124 520 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 NT5DC1Q5TFE4 455 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 ATL3Q6DD88 541 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 LRRC55Q6ZSA7 311 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 C11orf96Q7Z7L8 435 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 RHPN2Q8IUC4 686 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 TRIM59Q8IWR1 403 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 RAVER1Q8IY67 606 aaKnown RBP5.05□□□□□ -1.6
IFT43-207ENST00000554233 GPR65Q8IYL9 337 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 RNF168Q8IYW5 571 aaPredicted RBP5.05□□□□□ -1.6
IFT43-207ENST00000554233 DAW1Q8N136 415 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 SYT2Q8N9I0 419 aaPredicted RBP5.05□□□□□ -1.6
IFT43-207ENST00000554233 RNF149Q8NC42 400 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 CNNM3Q8NE01 707 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 SPPL3Q8TCT6 385 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 PLEKHO2Q8TD55 490 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 PIGOQ8TEQ8 1089 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 KIFAP3Q92845 792 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 TMEM143Q96AN5 459 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 YME1L1Q96TA2 773 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 SH2D3AQ9BRG2 576 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 C17orf80Q9BSJ5 609 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 BDH2Q9BUT1 245 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 NT5C3AQ9H0P0 336 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 PTPRHQ9HD43 1115 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 ST7Q9NRC1 585 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 ARHGAP28Q9P2N2 729 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 KCNG1Q9UIX4 513 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 COG5Q9UP83 839 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 PCDHB7Q9Y5E2 793 aa5.05□□□□□ -1.6
IFT43-207ENST00000554233 FANCMQ8IYD8 2048 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 FSD2A1L4K1 749 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 SH3D21A4FU49 640 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 H3BQV1 296 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 ACKR2O00590 384 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 STX6O43752 255 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 TSPAN1O60635 241 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 OFD1O75665 1012 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 ASMTLO95671 621 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 ITGB1P05556 798 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 MYL1P05976 194 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 ZSCAN20P17040 1043 aaPredicted RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 ARF4P18085 180 aaPredicted RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 LAG3P18627 525 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 PROZP22891 400 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 CCT6AP40227 531 aaKnown RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 ZNF143P52747 638 aaPredicted RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 DLX2Q07687 328 aaPredicted RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 DSC1Q08554 894 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 SMAD4Q13485 552 aaKnown RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 BTG3Q14201 252 aaPredicted RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 RTP5Q14D33 572 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 NCAPHQ15003 741 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 SLC39A14Q15043 492 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 PPP2R5AQ15172 486 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 TM4SF20Q53R12 229 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 XKR4Q5GH76 650 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 FAM102BQ5T8I3 360 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 KRT79Q5XKE5 535 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 RINT1Q6NUQ1 792 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 CNNM4Q6P4Q7 775 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 NOTUMQ6P988 496 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 C6orf15Q6UXA7 325 aaPredicted RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 TMEM184AQ6ZMB5 413 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 KCNK18Q7Z418 384 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 CARFQ8N187 725 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 LRRC43Q8N309 656 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 GSTCDQ8NEC7 633 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 LRRC15Q8TF66 581 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 CPA5Q8WXQ8 436 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 ARNTL2Q8WYA1 636 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 ZNF669Q96BR6 464 aaPredicted RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 ZBTB8AQ96BR9 441 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 MFSD3Q96ES6 412 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 SCYL1Q96KG9 808 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 MRGPRX3Q96LB0 322 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 SYT3Q9BQG1 590 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 MRPL9Q9BYD2 267 aaKnown RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 ZNF700Q9H0M5 742 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 CSRNP2Q9H175 543 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 C2orf40Q9H1Z8 148 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 BHMT2Q9H2M3 363 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 ST6GALNAC4Q9H4F1 302 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 CAAP1Q9H8G2 361 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 ARNT2Q9HBZ2 717 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 UBN1Q9NPG3 1134 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 BLOC1S4Q9NUP1 217 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 DDX19AQ9NUU7 478 aaKnown RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 PRMT7Q9NVM4 692 aaPredicted RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 STK39Q9UEW8 545 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 FBXO2Q9UK22 296 aaPredicted RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 ODF2LQ9ULJ1 636 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 DNM3Q9UQ16 869 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 SRPRBQ9Y5M8 271 aaKnown RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 NUP210Q8TEM1 1887 aaPredicted RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 KIF26AQ9ULI4 1882 aaPredicted RBP5.04□□□□□ -1.6
IFT43-207ENST00000554233 VPS13AQ96RL7 3174 aa5.04□□□□□ -1.6
IFT43-207ENST00000554233 ZDBF2Q9HCK1 2354 aa5.03□□□□□ -1.6
IFT43-207ENST00000554233 FRMD3A2A2Y4 597 aa5.03□□□□□ -1.6
IFT43-207ENST00000554233 ARHGEF35A5YM69 484 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms