RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 IL6STP40189 918 aaPredicted RBP9.89□□□□□ -0.83
SIX4-202ENST00000554079 TFAP4Q01664 338 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 PDIA2Q13087 525 aaKnown RBP9.89□□□□□ -0.83
SIX4-202ENST00000554079 FASTKD3Q14CZ7 662 aaKnown RBP9.89□□□□□ -0.83
SIX4-202ENST00000554079 DGKDQ16760 1214 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 IFIT1BQ5T764 474 aaKnown RBP9.89□□□□□ -0.83
SIX4-202ENST00000554079 RNF19BQ6ZMZ0 732 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 RALGPS2Q86X27 583 aaPredicted RBP9.89□□□□□ -0.83
SIX4-202ENST00000554079 FBXW8Q8N3Y1 598 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 TERB1Q8NA31 727 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 DAGLBQ8NCG7 672 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 BRSK1Q8TDC3 778 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 DPF3Q92784 378 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 PEX13Q92968 403 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 ACDQ96AP0 544 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 ALKBH8Q96BT7 664 aaKnown RBP9.89□□□□□ -0.83
SIX4-202ENST00000554079 LRGUKQ96M69 825 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 C17orf80Q9BSJ5 609 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 DHRS4Q9BTZ2 278 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 CAAP1Q9H8G2 361 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 FANCEQ9HB96 536 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 SCUBE2Q9NQ36 999 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 SH3GLB2Q9NR46 395 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 THG1LQ9NWX6 298 aaKnown RBP9.89□□□□□ -0.83
SIX4-202ENST00000554079 ITGA11Q9UKX5 1188 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 CNOT11Q9UKZ1 510 aaKnown RBP9.89□□□□□ -0.83
SIX4-202ENST00000554079 DNM3Q9UQ16 869 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 ATP11BQ9Y2G3 1177 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 PCDHA2Q9Y5H9 948 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 FAM170AA1A519 330 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 SDR42E2A6NKP2 422 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 M0QX08 132 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 AP3B1O00203 1094 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 TSPAN1O60635 241 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 GMNNO75496 209 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 ERBB2P04626 1255 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 CTRB1P17538 263 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 TGM1P22735 817 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 STAT3P40763 770 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 NR4A2P43354 598 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 ESRRGP62508 458 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 PPP2R2BQ00005 443 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 MESDQ14696 234 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 FAM26FQ5R3K3 315 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 CTRB2Q6GPI1 263 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 PPP4R4Q6NUP7 873 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 GALNT18Q6P9A2 607 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 FRMD5Q7Z6J6 570 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 DCP2Q8IU60 420 aaKnown RBP9.89□□□□□ -0.83
SIX4-202ENST00000554079 MARCH10Q8NA82 808 aaPredicted RBP9.89□□□□□ -0.83
SIX4-202ENST00000554079 RMND5BQ96G75 393 aaPredicted RBP9.89□□□□□ -0.83
SIX4-202ENST00000554079 WRNIP1Q96S55 665 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 SLC29A1Q99808 456 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 CLSTN3Q9BQT9 956 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 HERPUD2Q9BSE4 406 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 GPR88Q9GZN0 384 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 SMARCAD1Q9H4L7 1026 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 AS3MTQ9HBK9 375 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 ANLNQ9NQW6 1124 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 PNPLA3Q9NST1 481 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 PI4KBQ9UBF8 816 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 PCDHA12Q9UN75 941 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 SORCS3Q9UPU3 1222 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 TRAF6Q9Y4K3 522 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 ANGPTL3Q9Y5C1 460 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 SPATA31A1Q5TZJ5 1347 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 MYH9P35579 1960 aaKnown RBP9.88□□□□□ -0.83
SIX4-202ENST00000554079 SCN4AP35499 1836 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 A0A0B4J269 797 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 C7orf72A4D263 438 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 EML1O00423 815 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 GIPC1O14908 333 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 NUAK1O60285 661 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 ZC3H11AO75152 810 aaKnown RBP eCLIP9.88□□□□□ -0.83
SIX4-202ENST00000554079 PROCP04070 461 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 NELFEP18615 380 aaKnown RBP9.88□□□□□ -0.83
SIX4-202ENST00000554079 EIF2AK2P19525 551 aaKnown RBP9.88□□□□□ -0.83
SIX4-202ENST00000554079 CES1P23141 567 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 IDUAP35475 653 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 HPCAL1P37235 193 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 ETFBP38117 255 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 GRM5P41594 1212 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 TECP42680 631 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 MLLT10P55197 1068 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 TUBB3Q13509 450 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 INAVAQ3KP66 663 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 PPM1LQ5SGD2 360 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 SLX4IPQ5VYV7 408 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 CES4AQ5XG92 561 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 FAM117BQ6P1L5 589 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 KCNK18Q7Z418 384 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.88□□□□□ -0.83
SIX4-202ENST00000554079 PIAS4Q8N2W9 510 aaPredicted RBP9.88□□□□□ -0.83
SIX4-202ENST00000554079 CLIP4Q8N3C7 705 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 LCORLQ8N3X6 602 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 EFCAB3Q8N7B9 438 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 MIGA1Q8NAN2 632 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 PLBD2Q8NHP8 589 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 GPKOWQ92917 476 aaPredicted RBP eCLIP9.88□□□□□ -0.83
SIX4-202ENST00000554079 ZUFSPQ96AP4 578 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms