RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 NDRG2Q9UN36 371 aaKnown RBP24.43■■□□□ 1.5
NEK9-203ENST00000553945 MTF2Q9Y483 593 aaPredicted RBP24.43■■□□□ 1.5
NEK9-203ENST00000553945 SHISA7A6NL88 538 aa24.42■■□□□ 1.5
NEK9-203ENST00000553945 SPECC1L-ADORA2AF8WAN1 911 aa24.42■■□□□ 1.5
NEK9-203ENST00000553945 GABBR2O75899 941 aa24.42■■□□□ 1.5
NEK9-203ENST00000553945 DCNP07585 359 aaKnown RBP24.42■■□□□ 1.5
NEK9-203ENST00000553945 MLLT6P55198 1093 aaPredicted RBP24.42■■□□□ 1.5
NEK9-203ENST00000553945 BPIFB4P59827 614 aa24.42■■□□□ 1.5
NEK9-203ENST00000553945 POLR2FP61218 127 aaKnown RBP24.42■■□□□ 1.5
NEK9-203ENST00000553945 MEA1Q16626 185 aa24.42■■□□□ 1.5
NEK9-203ENST00000553945 EML3Q32P44 896 aa24.42■■□□□ 1.5
NEK9-203ENST00000553945 BHLHA9Q7RTU4 235 aa24.42■■□□□ 1.5
NEK9-203ENST00000553945 CPA6Q8N4T0 437 aa24.42■■□□□ 1.5
NEK9-203ENST00000553945 MSANTD3Q96H12 275 aa24.42■■□□□ 1.5
NEK9-203ENST00000553945 CDK5RAP1Q96SZ6 601 aaKnown RBP24.42■■□□□ 1.5
NEK9-203ENST00000553945 NELL2Q99435 816 aa24.42■■□□□ 1.5
NEK9-203ENST00000553945 DNMT3LQ9UJW3 386 aa24.42■■□□□ 1.5
NEK9-203ENST00000553945 SH3BP1Q9Y3L3 701 aa24.42■■□□□ 1.5
NEK9-203ENST00000553945 MIA3Q5JRA6 1907 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 E2F8A0AVK6 867 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 OTOL1A6NHN0 477 aaPredicted RBP24.41■■□□□ 1.5
NEK9-203ENST00000553945 TARSP26639 723 aaKnown RBP24.41■■□□□ 1.5
NEK9-203ENST00000553945 CTHP32929 405 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 DAOAP59103 153 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 NFKBIBQ15653 356 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 BTBD8Q5XKL5 378 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 KLHDC10Q6PID8 442 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 RSRC2Q7L4I2 434 aaKnown RBP24.41■■□□□ 1.5
NEK9-203ENST00000553945 LUZP1Q86V48 1076 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 RALGPS2Q86X27 583 aaPredicted RBP24.41■■□□□ 1.5
NEK9-203ENST00000553945 PASD1Q8IV76 773 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 ZNF276Q8N554 614 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 NEK11Q8NG66 645 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 KLF16Q9BXK1 252 aaPredicted RBP24.41■■□□□ 1.5
NEK9-203ENST00000553945 MIS12Q9H081 205 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 NLRC4Q9NPP4 1024 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 RASAL2Q9UJF2 1139 aa24.41■■□□□ 1.5
NEK9-203ENST00000553945 YJEFN3A6XGL0 299 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 E7ENQ6 273 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 F8VZ95 297 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 SLC9A3R1O14745 358 aaPredicted RBP24.4■■□□□ 1.5
NEK9-203ENST00000553945 EPHB6O15197 1021 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 KRT9P35527 623 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 TPM4P67936 248 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 GOLGA8FQ08AF8 430 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 GOLGA8DPQ0D2H9 430 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 EFEMP1Q12805 493 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 FILIP1LQ4L180 1135 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 C1orf228Q6PIY5 440 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 MIB1Q86YT6 1006 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 CCDC105Q8IYK2 499 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 SCML4Q8N228 414 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 KIAA1958Q8N8K9 716 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 STK32AQ8WU08 396 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 ERGIC2Q96RQ1 377 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 ECT2Q9H8V3 914 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 PCDHGC3Q9UN70 934 aa24.4■■□□□ 1.5
NEK9-203ENST00000553945 NFATC1O95644 943 aa24.39■■□□□ 1.49
NEK9-203ENST00000553945 CAVIN2O95810 425 aa24.39■■□□□ 1.49
NEK9-203ENST00000553945 ACADSBP45954 432 aa24.39■■□□□ 1.49
NEK9-203ENST00000553945 BSPRYQ5W0U4 402 aa24.39■■□□□ 1.49
NEK9-203ENST00000553945 TXNDC11Q6PKC3 985 aa24.39■■□□□ 1.49
NEK9-203ENST00000553945 CLEC4CQ8WTT0 213 aa24.39■■□□□ 1.49
NEK9-203ENST00000553945 IRGQQ8WZA9 623 aa24.39■■□□□ 1.49
NEK9-203ENST00000553945 EDEM1Q92611 657 aa24.39■■□□□ 1.49
NEK9-203ENST00000553945 WBP2Q969T9 261 aa24.39■■□□□ 1.49
NEK9-203ENST00000553945 OSBPL6Q9BZF3 934 aa24.39■■□□□ 1.49
NEK9-203ENST00000553945 RTN4Q9NQC3 1192 aaKnown RBP24.39■■□□□ 1.49
NEK9-203ENST00000553945 CYTH4Q9UIA0 394 aa24.39■■□□□ 1.49
NEK9-203ENST00000553945 DAAM1Q9Y4D1 1078 aa24.39■■□□□ 1.49
NEK9-203ENST00000553945 ZDBF2Q9HCK1 2354 aa24.39■■□□□ 1.49
NEK9-203ENST00000553945 ZNF318Q5VUA4 2279 aa24.38■■□□□ 1.49
NEK9-203ENST00000553945 NCAM2O15394 837 aa24.38■■□□□ 1.49
NEK9-203ENST00000553945 TEX33O43247 280 aa24.38■■□□□ 1.49
NEK9-203ENST00000553945 FBXO21O94952 628 aa24.38■■□□□ 1.49
NEK9-203ENST00000553945 NR1H3Q13133 447 aa24.38■■□□□ 1.49
NEK9-203ENST00000553945 SCUBE3Q8IX30 993 aa24.38■■□□□ 1.49
NEK9-203ENST00000553945 RNF139Q8WU17 664 aa24.38■■□□□ 1.49
NEK9-203ENST00000553945 SPAG5Q96R06 1193 aa24.38■■□□□ 1.49
NEK9-203ENST00000553945 SLC4A5Q9BY07 1137 aa24.38■■□□□ 1.49
NEK9-203ENST00000553945 PDCL3Q9H2J4 239 aa24.38■■□□□ 1.49
NEK9-203ENST00000553945 TBC1D14Q9P2M4 693 aa24.38■■□□□ 1.49
NEK9-203ENST00000553945 LSM7Q9UK45 103 aaKnown RBP24.38■■□□□ 1.49
NEK9-203ENST00000553945 GOLGA6L19H0YKK7 550 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 GFPT2O94808 682 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 SERPINC1P01008 464 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 HMBSP08397 361 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 CYP11B1P15538 503 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 GJA4P35212 333 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 RPL34P49207 117 aaKnown RBP24.37■■□□□ 1.49
NEK9-203ENST00000553945 AMPD2Q01433 879 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 PDCLQ13371 301 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 PON2Q15165 354 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 BBS7Q8IWZ6 715 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 WDTC1Q8N5D0 677 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 DTWD2Q8NBA8 298 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 GOLGA1Q92805 767 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 LHX5Q9H2C1 402 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 ABCC13Q9NSE7 274 aa24.37■■□□□ 1.49
NEK9-203ENST00000553945 MARCH2Q9P0N8 246 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms