RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 GABBR2O75899 941 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 PDHA1P08559 390 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 TSHRP16473 764 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 GRIA1P42261 906 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 ERFP50548 548 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 ATXN1P54253 815 aaKnown RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 BST1Q10588 318 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 KRT81Q14533 505 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 RCN1Q15293 331 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 SMAD1Q15797 465 aaKnown RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 GOLGA7BQ2TAP0 167 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 CCDC14Q49A88 953 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 TEX44Q53QW1 395 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 CELF3Q5SZQ8 465 aaKnown RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 SCYL2Q6P3W7 929 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 APOBEC3FQ8IUX4 373 aaKnown RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 UNC5BQ8IZJ1 945 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 ARMC2Q8NEN0 867 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 SHKBP1Q8TBC3 707 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 OXNAD1Q96HP4 312 aaPredicted RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 ACAP3Q96P50 834 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 BTBD10Q9BSF8 475 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 CNPY3Q9BT09 278 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 SNRNP25Q9BV90 132 aaKnown RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 OSBPL1AQ9BXW6 950 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 PCDH18Q9HCL0 1135 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 TXNRD2Q9NNW7 524 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 NGRNQ9NPE2 291 aaKnown RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 BATF3Q9NR55 127 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 ETNK2Q9NVF9 386 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 ASNSD1Q9NWL6 643 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 NMRK1Q9NWW6 199 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 TAS2R1Q9NYW7 299 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 TNFSF13BQ9Y275 285 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 MFHAS1Q9Y4C4 1052 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 LRRC42Q9Y546 428 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 IKBKGQ9Y6K9 419 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 A0A087WZ62 844 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 FZD9O00144 591 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 COPEO14579 308 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 PPEF2O14830 753 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 USP2O75604 605 aaPredicted RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 NEBLO76041 1014 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 IL18RAPO95256 599 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 C22orf31O95567 290 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 METTL18O95568 372 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 APRTP07741 180 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 LINGO3P0C6S8 592 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 NEFHP12036 1026 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 RASSF2P50749 326 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 GBE1Q04446 702 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 ZBTB16Q05516 673 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 SLC10A6Q3KNW5 377 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 PMF1Q6P1K2 205 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 OLFML1Q6UWY5 402 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 UNC5AQ6ZN44 842 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 RFX8Q6ZV50 586 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 SLC26A11Q86WA9 606 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 TTC30AQ86WT1 665 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 NETO2Q8NC67 525 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 CLEC4CQ8WTT0 213 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 FAM172AQ8WUF8 416 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 KHSRPQ92945 711 aaKnown RBP eCLIP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 RTP4Q96DX8 246 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 SPDL1Q96EA4 605 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 HPDLQ96IR7 371 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 SPATA33Q96N06 139 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 FDXACB1Q9BRP7 624 aaPredicted RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 TRIM6Q9C030 488 aaPredicted RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 RNPEPQ9H4A4 650 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 GBA2Q9HCG7 927 aaPredicted RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 PNPLA8Q9NP80 782 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 PDGFCQ9NRA1 345 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 PCMTD2Q9NV79 361 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 PPP1R1BQ9UD71 204 aaPredicted RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 ZC3H7BQ9UGR2 993 aaKnown RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 WASF2Q9Y6W5 498 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 SLC15A5A6NIM6 579 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 SMAPO00193 183 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 APOL1O14791 398 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 GYG2O15488 501 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 GAS2O43903 313 aaKnown RBP7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 PRPSAP2O60256 369 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 CCDC22O60826 627 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 TGDSO95455 350 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 ZBED1O96006 694 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 KITP10721 976 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 VDRP11473 427 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 ATP6V1C1P21283 382 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 OSBPP22059 807 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 AMPD1P23109 780 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 ADORA2AP29274 412 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 CCNFP41002 786 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 INCA1Q0VD86 236 aa7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 PPP6R3Q5H9R7 873 aaPredicted RBP7.19□□□□□ -1.26
LINC-ROR-201ENST00000553704 TTC39BQ5VTQ0 682 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms