RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 PIAS3Q9Y6X2 628 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 YJEFN3A6XGL0 299 aa23.94■■□□□ 1.42
TDP1-206ENST00000553569 E7ENQ6 273 aa23.94■■□□□ 1.42
TDP1-206ENST00000553569 SOX5P35711 763 aa23.94■■□□□ 1.42
TDP1-206ENST00000553569 SOX9P48436 509 aa23.94■■□□□ 1.42
TDP1-206ENST00000553569 PRKCQQ04759 706 aa23.94■■□□□ 1.42
TDP1-206ENST00000553569 PDCLQ13371 301 aa23.94■■□□□ 1.42
TDP1-206ENST00000553569 BTBD8Q5XKL5 378 aa23.94■■□□□ 1.42
TDP1-206ENST00000553569 C1orf131Q8NDD1 294 aaKnown RBP23.94■■□□□ 1.42
TDP1-206ENST00000553569 OSCP1Q8WVF1 389 aa23.94■■□□□ 1.42
TDP1-206ENST00000553569 FAM83CQ9BQN1 747 aa23.94■■□□□ 1.42
TDP1-206ENST00000553569 FOXQ1Q9C009 403 aa23.94■■□□□ 1.42
TDP1-206ENST00000553569 HPS4Q9NQG7 708 aa23.94■■□□□ 1.42
TDP1-206ENST00000553569 RASAL2Q9UJF2 1139 aa23.94■■□□□ 1.42
TDP1-206ENST00000553569 DNMT3LQ9UJW3 386 aa23.94■■□□□ 1.42
TDP1-206ENST00000553569 CD72P21854 359 aa23.93■■□□□ 1.42
TDP1-206ENST00000553569 STAT1P42224 750 aa23.93■■□□□ 1.42
TDP1-206ENST00000553569 ACADSBP45954 432 aa23.93■■□□□ 1.42
TDP1-206ENST00000553569 PDGFRLQ15198 375 aa23.93■■□□□ 1.42
TDP1-206ENST00000553569 CACNA2D4Q7Z3S7 1137 aa23.93■■□□□ 1.42
TDP1-206ENST00000553569 NOP9Q86U38 636 aaKnown RBP23.93■■□□□ 1.42
TDP1-206ENST00000553569 MIB1Q86YT6 1006 aa23.93■■□□□ 1.42
TDP1-206ENST00000553569 CDK5RAP1Q96SZ6 601 aaKnown RBP23.93■■□□□ 1.42
TDP1-206ENST00000553569 SH3BP1Q9Y3L3 701 aa23.93■■□□□ 1.42
TDP1-206ENST00000553569 CEP83Q9Y592 693 aa23.93■■□□□ 1.42
TDP1-206ENST00000553569 KMT2EQ8IZD2 1858 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 FAM170AA1A519 330 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 E5RJQ4 531 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 FBXO21O94952 628 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 VCPP55072 806 aaKnown RBP23.92■■□□□ 1.42
TDP1-206ENST00000553569 STARD6P59095 220 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 EFEMP1Q12805 493 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 RUNX3Q13761 415 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 ITPRIPL2Q3MIP1 535 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 BSPRYQ5W0U4 402 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 SCML4Q8N228 414 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 RNF214Q8ND24 703 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 EPS8L1Q8TE68 723 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 STK32AQ8WU08 396 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 EDEM1Q92611 657 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 WBP2Q969T9 261 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 KLF16Q9BXK1 252 aaPredicted RBP23.92■■□□□ 1.42
TDP1-206ENST00000553569 SLC4A5Q9BY07 1137 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 LHX5Q9H2C1 402 aa23.92■■□□□ 1.42
TDP1-206ENST00000553569 MIA3Q5JRA6 1907 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 RPL34P49207 117 aaKnown RBP23.91■■□□□ 1.42
TDP1-206ENST00000553569 GOLGA8FQ08AF8 430 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 GOLGA8DPQ0D2H9 430 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 UBXN2BQ14CS0 331 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 EML3Q32P44 896 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 ASTLQ6HA08 431 aaPredicted RBP23.91■■□□□ 1.42
TDP1-206ENST00000553569 KLHDC10Q6PID8 442 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 SCUBE3Q8IX30 993 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 WDTC1Q8N5D0 677 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 SLC20A1Q8WUM9 679 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 IRGQQ8WZA9 623 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 GOLGA1Q92805 767 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 ATP2A3Q93084 1043 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 NOX5Q96PH1 765 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 LINC00597Q9H2U6 94 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 TJP2Q9UDY2 1190 aa23.91■■□□□ 1.42
TDP1-206ENST00000553569 A0A1W2PQC6 194 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 KANSL1LA0AUZ9 987 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 LTFP02788 710 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 HMBSP08397 361 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 MMEP08473 750 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 UBASH3AP57075 661 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 ARID5AQ03989 594 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 NR1I3Q14994 352 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 ZNF852Q6ZMS4 543 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 CPA6Q8N4T0 437 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 ZNF276Q8N554 614 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 RNF139Q8WU17 664 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 DDX1Q92499 740 aaKnown RBP23.9■■□□□ 1.42
TDP1-206ENST00000553569 FAM149B1Q96BN6 582 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 PPP1R13BQ96KQ4 1090 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 CPXM1Q96SM3 734 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 DDX23Q9BUQ8 820 aaKnown RBP23.9■■□□□ 1.42
TDP1-206ENST00000553569 C8orf33Q9H7E9 229 aaPredicted RBP23.9■■□□□ 1.42
TDP1-206ENST00000553569 MARCH2Q9P0N8 246 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 STRIP2Q9ULQ0 834 aa23.9■■□□□ 1.42
TDP1-206ENST00000553569 NDRG2Q9UN36 371 aaKnown RBP23.9■■□□□ 1.42
TDP1-206ENST00000553569 E2F8A0AVK6 867 aa23.89■■□□□ 1.41
TDP1-206ENST00000553569 OTOL1A6NHN0 477 aaPredicted RBP23.89■■□□□ 1.41
TDP1-206ENST00000553569 SPECC1L-ADORA2AF8WAN1 911 aa23.89■■□□□ 1.41
TDP1-206ENST00000553569 PAPSS1O43252 624 aaPredicted RBP23.89■■□□□ 1.41
TDP1-206ENST00000553569 CTHP32929 405 aa23.89■■□□□ 1.41
TDP1-206ENST00000553569 TMEM110Q86TL2 294 aa23.89■■□□□ 1.41
TDP1-206ENST00000553569 TMEM105Q8N8V8 129 aa23.89■■□□□ 1.41
TDP1-206ENST00000553569 TMEM35BQ8NCS4 154 aa23.89■■□□□ 1.41
TDP1-206ENST00000553569 FAM3CQ92520 227 aa23.89■■□□□ 1.41
TDP1-206ENST00000553569 LTB4R2Q9NPC1 389 aa23.89■■□□□ 1.41
TDP1-206ENST00000553569 ABCC13Q9NSE7 274 aa23.89■■□□□ 1.41
TDP1-206ENST00000553569 OLA1Q9NTK5 396 aaKnown RBP23.89■■□□□ 1.41
TDP1-206ENST00000553569 IFNKQ9P0W0 207 aa23.89■■□□□ 1.41
TDP1-206ENST00000553569 NOCTQ9UK39 431 aaKnown RBP23.89■■□□□ 1.41
TDP1-206ENST00000553569 ZDBF2Q9HCK1 2354 aa23.89■■□□□ 1.41
TDP1-206ENST00000553569 SLC12A8A0AV02 714 aa23.88■■□□□ 1.41
TDP1-206ENST00000553569 SHISA7A6NL88 538 aa23.88■■□□□ 1.41
TDP1-206ENST00000553569 MAN2B1O00754 1011 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms