RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ALLCQ8N6M5 410 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 USP33Q8TEY7 942 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 TPSD1Q9BZJ3 242 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 COMMD8Q9NX08 183 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 PLK2Q9NYY3 685 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 RASAL2Q9UJF2 1139 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 RIF1Q5UIP0 2472 aaKnown RBP19.17■□□□□ 0.66
SHMT2-206ENST00000553529 O00370 1275 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 TKTL1P51854 596 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 EFEMP1Q12805 493 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 KCNH2Q12809 1159 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 HSP90AA4PQ58FG1 418 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 TMEM92Q6UXU6 159 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 TOGARAM2Q6ZUX3 1019 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 CCDC186Q7Z3E2 898 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 KBTBD6Q86V97 674 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 WDR5BQ86VZ2 330 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 ETFBKMTQ8IXQ9 262 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 PPM1KQ8N3J5 372 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 FAM160A2Q8N612 972 aaPredicted RBP19.17■□□□□ 0.66
SHMT2-206ENST00000553529 CLEC4CQ8WTT0 213 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 SMOC1Q9H4F8 434 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 KIAA1468Q9P260 1216 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 AJAP1Q9UKB5 411 aaPredicted RBP19.17■□□□□ 0.66
SHMT2-206ENST00000553529 SLC8A2Q9UPR5 921 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 PCDHB4Q9Y5E5 795 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 GVINP1Q7Z2Y8 2422 aa19.17■□□□□ 0.66
SHMT2-206ENST00000553529 SGK1O00141 431 aa19.16■□□□□ 0.66
SHMT2-206ENST00000553529 STC2O76061 302 aa19.16■□□□□ 0.66
SHMT2-206ENST00000553529 KAT7O95251 611 aa19.16■□□□□ 0.66
SHMT2-206ENST00000553529 ATP5C1P36542 298 aaKnown RBP19.16■□□□□ 0.66
SHMT2-206ENST00000553529 ADIGQ0VDE8 80 aa19.16■□□□□ 0.66
SHMT2-206ENST00000553529 NR1H3Q13133 447 aa19.16■□□□□ 0.66
SHMT2-206ENST00000553529 RAB41Q5JT25 222 aa19.16■□□□□ 0.66
SHMT2-206ENST00000553529 IRF2BP1Q8IU81 584 aa19.16■□□□□ 0.66
SHMT2-206ENST00000553529 CREBRFQ8IUR6 639 aa19.16■□□□□ 0.66
SHMT2-206ENST00000553529 FRMD1Q8N878 549 aa19.16■□□□□ 0.66
SHMT2-206ENST00000553529 ANKRD52Q8NB46 1076 aa19.16■□□□□ 0.66
SHMT2-206ENST00000553529 CRACR2AQ9BSW2 395 aa19.16■□□□□ 0.66
SHMT2-206ENST00000553529 FAM126AQ9BYI3 521 aaPredicted RBP19.16■□□□□ 0.66
SHMT2-206ENST00000553529 INTS2Q9H0H0 1204 aaKnown RBP19.16■□□□□ 0.66
SHMT2-206ENST00000553529 METTL14Q9HCE5 456 aaKnown RBP19.16■□□□□ 0.66
SHMT2-206ENST00000553529 ARHGEF4Q9NR80 690 aa19.16■□□□□ 0.66
SHMT2-206ENST00000553529 SPHK2Q9NRA0 654 aa19.16■□□□□ 0.66
SHMT2-206ENST00000553529 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.16■□□□□ 0.66
SHMT2-206ENST00000553529 PTPRZ1P23471 2315 aaPredicted RBP19.16■□□□□ 0.66
SHMT2-206ENST00000553529 EP300Q09472 2414 aaPredicted RBP19.15■□□□□ 0.66
SHMT2-206ENST00000553529 FAM170AA1A519 330 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 NEDD8-MDP1E9PL57 170 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 TULP3O75386 442 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 KLF8O95600 359 aaPredicted RBP19.15■□□□□ 0.66
SHMT2-206ENST00000553529 LCP1P13796 627 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 WASP42768 502 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 NRLP54845 237 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 PPP2R5DQ14738 602 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 PKDCCQ504Y2 493 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 SGO2Q562F6 1265 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 Q6ZNB5 142 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 DDX42Q86XP3 938 aaKnown RBP eCLIP19.15■□□□□ 0.66
SHMT2-206ENST00000553529 TXNDC5Q8NBS9 432 aaKnown RBP19.15■□□□□ 0.66
SHMT2-206ENST00000553529 RBBP8NLQ8NC74 664 aaPredicted RBP19.15■□□□□ 0.66
SHMT2-206ENST00000553529 EDEM1Q92611 657 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 NT5C1BQ96P26 610 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 PNKPQ96T60 521 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 ACOX2Q99424 681 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 PNPLA8Q9NP80 782 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 CLEC4EQ9ULY5 219 aa19.15■□□□□ 0.66
SHMT2-206ENST00000553529 DNAH14Q0VDD8 3507 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 BICDL2A1A5D9 508 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 YJEFN3A6XGL0 299 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 E7ENQ6 273 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 SLC9A3R1O14745 358 aaPredicted RBP19.14■□□□□ 0.65
SHMT2-206ENST00000553529 ADAM23O75077 832 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 ADH1CP00326 375 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 KIR2DL1P43626 348 aaPredicted RBP19.14■□□□□ 0.65
SHMT2-206ENST00000553529 YWHAGP61981 247 aaKnown RBP eCLIP19.14■□□□□ 0.65
SHMT2-206ENST00000553529 AMPD2Q01433 879 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 DPCR1Q3MIW9 517 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 PMF1Q6P1K2 205 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 HTR3DQ70Z44 454 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 SYT13Q7L8C5 426 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 IL17RCQ8NAC3 791 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 EHBP1Q8NDI1 1231 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 SECISBP2LQ93073 1101 aaKnown RBP19.14■□□□□ 0.65
SHMT2-206ENST00000553529 CNOT6LQ96LI5 555 aaKnown RBP19.14■□□□□ 0.65
SHMT2-206ENST00000553529 TBC1D14Q9P2M4 693 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 SFMBT1Q9UHJ3 866 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 DNMT3LQ9UJW3 386 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 USP18Q9UMW8 372 aa19.14■□□□□ 0.65
SHMT2-206ENST00000553529 XPO1O14980 1071 aaKnown RBP19.13■□□□□ 0.65
SHMT2-206ENST00000553529 AXIN1O15169 862 aa19.13■□□□□ 0.65
SHMT2-206ENST00000553529 MSI1O43347 362 aaKnown RBP19.13■□□□□ 0.65
SHMT2-206ENST00000553529 SLC9A1P19634 815 aa19.13■□□□□ 0.65
SHMT2-206ENST00000553529 BCKDHBP21953 392 aa19.13■□□□□ 0.65
SHMT2-206ENST00000553529 BCAT1P54687 386 aa19.13■□□□□ 0.65
SHMT2-206ENST00000553529 GAD2Q05329 585 aa19.13■□□□□ 0.65
SHMT2-206ENST00000553529 ANO7Q6IWH7 933 aa19.13■□□□□ 0.65
SHMT2-206ENST00000553529 CEP68Q76N32 757 aa19.13■□□□□ 0.65
SHMT2-206ENST00000553529 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.13■□□□□ 0.65
SHMT2-206ENST00000553529 MDGA1Q8NFP4 955 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms