RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 KCNJ18B7U540 433 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 TRIM66O15016 1216 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 GREM1O60565 184 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 NDUFS2O75306 463 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 CILPO75339 1184 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 TMEM191BP0C7N4 346 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 IRF1P10914 325 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 UBA7P41226 1012 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 PPP3CCP48454 512 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 L1TD1Q5T7N2 865 aaKnown RBP9.01□□□□□ -0.97
CDK4-213ENST00000552713 TDRD10Q5VZ19 366 aaKnown RBP9.01□□□□□ -0.97
CDK4-213ENST00000552713 BTBD8Q5XKL5 378 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 KIAA1324Q6UXG2 1013 aaKnown RBP9.01□□□□□ -0.97
CDK4-213ENST00000552713 DPH6Q7L8W6 267 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 TRMT11Q7Z4G4 463 aaKnown RBP9.01□□□□□ -0.97
CDK4-213ENST00000552713 DDX42Q86XP3 938 aaKnown RBP eCLIP9.01□□□□□ -0.97
CDK4-213ENST00000552713 CHPFQ8IZ52 775 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 DNASE2BQ8WZ79 361 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 HVCN1Q96D96 273 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 DNAJC19Q96DA6 116 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 OTUB2Q96DC9 234 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 AK8Q96MA6 479 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 CEP295NLQ96MC4 621 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 KCNK16Q96T55 309 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 B3GNT5Q9BYG0 378 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 FAM124BQ9H5Z6 455 aaPredicted RBP9.01□□□□□ -0.97
CDK4-213ENST00000552713 GAREM1Q9H706 876 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 MRPL44Q9H9J2 332 aaKnown RBP9.01□□□□□ -0.97
CDK4-213ENST00000552713 TM7SF3Q9NS93 570 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 DNAJC17Q9NVM6 304 aaKnown RBP9.01□□□□□ -0.97
CDK4-213ENST00000552713 INTS13Q9NVM9 706 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 PPP4R2Q9NY27 417 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 SH3BP1Q9Y3L3 701 aa9.01□□□□□ -0.97
CDK4-213ENST00000552713 COL6A6A6NMZ7 2263 aa9□□□□□ -0.97
CDK4-213ENST00000552713 A0A087WV48 116 aa9□□□□□ -0.97
CDK4-213ENST00000552713 A0A1B0GTW7 788 aa9□□□□□ -0.97
CDK4-213ENST00000552713 NEDD8-MDP1E9PL57 170 aa9□□□□□ -0.97
CDK4-213ENST00000552713 SLC26A4O43511 780 aa9□□□□□ -0.97
CDK4-213ENST00000552713 CST3P01034 146 aaPredicted RBP9□□□□□ -0.97
CDK4-213ENST00000552713 CISD3P0C7P0 127 aa9□□□□□ -0.97
CDK4-213ENST00000552713 GNSP15586 552 aa9□□□□□ -0.97
CDK4-213ENST00000552713 PTPN1P18031 435 aaKnown RBP9□□□□□ -0.97
CDK4-213ENST00000552713 GARTP22102 1010 aa9□□□□□ -0.97
CDK4-213ENST00000552713 YWHAQP27348 245 aa9□□□□□ -0.97
CDK4-213ENST00000552713 ITPKBP27987 946 aa9□□□□□ -0.97
CDK4-213ENST00000552713 CD6P30203 668 aa9□□□□□ -0.97
CDK4-213ENST00000552713 ABCD1P33897 745 aa9□□□□□ -0.97
CDK4-213ENST00000552713 GNL1P36915 607 aaPredicted RBP9□□□□□ -0.97
CDK4-213ENST00000552713 MAPRE1Q15691 268 aaKnown RBP9□□□□□ -0.97
CDK4-213ENST00000552713 HLA-BQ31612 363 aa9□□□□□ -0.97
CDK4-213ENST00000552713 SYCP2LQ5T4T6 812 aa9□□□□□ -0.97
CDK4-213ENST00000552713 DCAF12L1Q5VU92 463 aa9□□□□□ -0.97
CDK4-213ENST00000552713 GRAMD4Q6IC98 578 aa9□□□□□ -0.97
CDK4-213ENST00000552713 DBX2Q6ZNG2 339 aa9□□□□□ -0.97
CDK4-213ENST00000552713 TPGS1Q6ZTW0 290 aa9□□□□□ -0.97
CDK4-213ENST00000552713 PAQR9Q6ZVX9 377 aa9□□□□□ -0.97
CDK4-213ENST00000552713 CBWD2Q8IUF1 395 aa9□□□□□ -0.97
CDK4-213ENST00000552713 NUP93Q8N1F7 819 aa9□□□□□ -0.97
CDK4-213ENST00000552713 KRI1Q8N9T8 703 aaKnown RBP9□□□□□ -0.97
CDK4-213ENST00000552713 PIP4K2CQ8TBX8 421 aa9□□□□□ -0.97
CDK4-213ENST00000552713 FBXO32Q969P5 355 aa9□□□□□ -0.97
CDK4-213ENST00000552713 TOE1Q96GM8 510 aaKnown RBP9□□□□□ -0.97
CDK4-213ENST00000552713 EPSTI1Q96J88 318 aa9□□□□□ -0.97
CDK4-213ENST00000552713 ZSCAN31Q96LW9 406 aaPredicted RBP9□□□□□ -0.97
CDK4-213ENST00000552713 SLITRK1Q96PX8 696 aa9□□□□□ -0.97
CDK4-213ENST00000552713 ACCSQ96QU6 501 aa9□□□□□ -0.97
CDK4-213ENST00000552713 MMS19Q96T76 1030 aa9□□□□□ -0.97
CDK4-213ENST00000552713 KIF2CQ99661 725 aa9□□□□□ -0.97
CDK4-213ENST00000552713 GPR174Q9BXC1 333 aa9□□□□□ -0.97
CDK4-213ENST00000552713 MKRN2Q9H000 416 aaKnown RBP9□□□□□ -0.97
CDK4-213ENST00000552713 MIR1-1HGQ9H1L0 117 aa9□□□□□ -0.97
CDK4-213ENST00000552713 ASH1LQ9NR48 2969 aaKnown RBP9□□□□□ -0.97
CDK4-213ENST00000552713 WSB2Q9NYS7 404 aaPredicted RBP9□□□□□ -0.97
CDK4-213ENST00000552713 GMIPQ9P107 970 aa9□□□□□ -0.97
CDK4-213ENST00000552713 SUSD2Q9UGT4 822 aa9□□□□□ -0.97
CDK4-213ENST00000552713 MEI4A8MW99 385 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 CACNG3O60359 315 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 PRPF6O94906 941 aaKnown RBP8.99□□□□□ -0.97
CDK4-213ENST00000552713 GCNT3O95395 438 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 TBX18O95935 607 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 LDHAP00338 332 aaKnown RBP8.99□□□□□ -0.97
CDK4-213ENST00000552713 NCAM1P13591 858 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 HOXB1P14653 301 aaPredicted RBP8.99□□□□□ -0.97
CDK4-213ENST00000552713 TYRP14679 529 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 CLDN6P56747 220 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 MYO1EQ12965 1108 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 FUT11Q495W5 492 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 WDR45BQ5MNZ6 344 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 HECTD3Q5T447 861 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 SNX30Q5VWJ9 437 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 SCUBE3Q8IX30 993 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 OR6B3Q8NGW1 331 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 RASSF8Q8NHQ8 419 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 C1orf216Q8TAB5 229 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 RHBDD1Q8TEB9 315 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 FOXJ1Q92949 421 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 BHMTQ93088 406 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 ELMO3Q96BJ8 720 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 ANKRD36BP1Q96IX9 119 aa8.99□□□□□ -0.97
CDK4-213ENST00000552713 BBS2Q9BXC9 721 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms