RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	TRIML1	Q8N9V2	468 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	CACTIN	Q8WUQ7	758 aa	Known RBP	7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	ATXN2L	Q8WWM7	1075 aa	Known RBP	7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	RIN2	Q8WYP3	895 aa	Predicted RBP	7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	FAM84A	Q96KN4	292 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	CGRRF1	Q99675	332 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	RXFP1	Q9HBX9	757 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	ATP13A1	Q9HD20	1204 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	INTS13	Q9NVM9	706 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	CLDND1	Q9NY35	253 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	CLEC1B	Q9P126	229 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	FNIP2	Q9P278	1114 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	SIX4	Q9UIU6	781 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	ADAM30	Q9UKF2	790 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	ITGA11	Q9UKX5	1188 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	NUB1	Q9Y5A7	615 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	CAPN6	Q9Y6Q1	641 aa		7.15	□□□□□ -1.26
CNOT2-238	ENST00000552422	NUP210	Q8TEM1	1887 aa	Predicted RBP	7.15	□□□□□ -1.27
CNOT2-238	ENST00000552422	AKAP3	O75969	853 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	C1R	P00736	705 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	ITGB3	P05106	788 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	TMEM191B	P0C7N4	346 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	SRGAP2B	P0DMP2	458 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	EPCAM	P16422	314 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	TNNI1	P19237	187 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	PAX3	P23760	479 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	RPL13	P26373	211 aa	Known RBP	7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	POLR2B	P30876	1174 aa	Known RBP	7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	PPP1R2	P41236	205 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	PNPLA4	P41247	253 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	NDUFV1	P49821	464 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	TAF6	P49848	677 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	PMS1	P54277	932 aa	Known RBP	7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	ADAM9	Q13443	819 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	CAMK2G	Q13555	558 aa	Predicted RBP	7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	STIM1	Q13586	685 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	LMBRD2	Q68DH5	695 aa	Predicted RBP	7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	FOXR2	Q6PJQ5	311 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	BNC2	Q6ZN30	1099 aa	Predicted RBP	7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	ANKS3	Q6ZW76	656 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	PPFIBP1	Q86W92	1011 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	CEP57	Q86XR8	500 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	ZC3H3	Q8IXZ2	948 aa	Known RBP	7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	LRRC52	Q8N7C0	313 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	SMRP1	Q8NCR6	262 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	OR5B17	Q8NGF7	314 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	LNX1	Q8TBB1	728 aa	Predicted RBP	7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	GPT2	Q8TD30	523 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	PLEKHO2	Q8TD55	490 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	PARD3B	Q8TEW8	1205 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	SLC22A17	Q8WUG5	538 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	CCDC127	Q96BQ5	260 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	DHTKD1	Q96HY7	919 aa	Predicted RBP	7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	ANKRD36BP1	Q96IX9	119 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	MSLNL	Q96KJ4	702 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	COX4I2	Q96KJ9	171 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	ZNF560	Q96MR9	790 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	KLHL5	Q96PQ7	755 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	FNBP1	Q96RU3	617 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	NUP62CL	Q9H1M0	184 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	CARS2	Q9HA77	564 aa	Known RBP	7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	SEMA3G	Q9NS98	782 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	MTRR	Q9UBK8	725 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	BARX2	Q9UMQ3	279 aa	Predicted RBP	7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	FRMD4B	Q9Y2L6	1034 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	WDFY4	Q6ZS81	3184 aa		7.14	□□□□□ -1.27
CNOT2-238	ENST00000552422	ARHGEF37	A1IGU5	675 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	TRIM49B	A6NDI0	452 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	LRRIQ3	A6PVS8	624 aa	Predicted RBP	7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	KPNA7	A9QM74	516 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422		H3BQ06	376 aa	Predicted RBP	7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	IKBKB	O14920	756 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	SLC16A3	O15427	465 aa	Known RBP	7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	ADAM12	O43184	909 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	TGM5	O43548	720 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	TBC1D4	O60343	1298 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	OAZ2	O95190	189 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	MBD3	O95983	291 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	GLUD1	P00367	558 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	TNNC2	P02585	160 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	PF4	P02776	101 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	ODC1	P11926	461 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	HOXB8	P17481	243 aa	Predicted RBP	7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	RPL17	P18621	184 aa	Known RBP	7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	TYMP	P19971	482 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	CCNE1	P24864	410 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	KLRC2	P26717	231 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	GBP2	P32456	591 aa	Predicted RBP	7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	PSMC2	P35998	433 aa	Known RBP	7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	ETV3	P41162	512 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	KIR3DL1	P43629	444 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	KCNQ1	P51787	676 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	AP3M2	P53677	418 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	MRPS5	P82675	430 aa	Known RBP	7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	FKBP3	Q00688	224 aa	Known RBP	7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	LMNB2	Q03252	620 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	YWHAH	Q04917	246 aa	Predicted RBP	7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	ENPEP	Q07075	957 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	BFSP1	Q12934	665 aa		7.13	□□□□□ -1.27
CNOT2-238	ENST00000552422	MRPL58	Q14197	206 aa	Known RBP	7.13	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms